RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 HMGB4Q8WW32 186 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 AP3S1Q92572 193 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 CNOT9Q92600 299 aaKnown RBP9.82□□□□□ -0.84
NECAP1-216ENST00000639167 PTCHD1Q96NR3 888 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 ATF6BQ99941 703 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 IFT27Q9BW83 186 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 OR51V1Q9H2C8 321 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 IL21RQ9HBE5 538 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 NEK6Q9HC98 313 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 DUSP22Q9NRW4 184 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 USP36Q9P275 1121 aaKnown RBP9.82□□□□□ -0.84
NECAP1-216ENST00000639167 GRIP1Q9Y3R0 1128 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 A0A087WV62 115 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 A0A0J9YY10 115 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 TNFRSF10CO14798 259 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 KRT8P05787 483 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 GSTT2P0CG29 244 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 GSTT2BP0CG30 244 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 CLUP10909 449 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 NOS3P29474 1203 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 PPP3R1P63098 170 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 HTR4Q13639 388 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 P2RY14Q15391 338 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 SF3B4Q15427 424 aaKnown RBP eCLIP9.82□□□□□ -0.844e-7■■■■■ 38
NECAP1-216ENST00000639167 EXOSC6Q5RKV6 272 aaKnown RBP9.82□□□□□ -0.84
NECAP1-216ENST00000639167 ATAD3CQ5T2N8 411 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 TMEM91Q6ZNR0 172 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 MEPCEQ7L2J0 689 aaKnown RBP9.82□□□□□ -0.84
NECAP1-216ENST00000639167 GDPD1Q8N9F7 314 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 SCAIQ8N9R8 606 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 OR10H4Q8NGA5 316 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 OR52R1Q8NGF1 315 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 OR9A4Q8NGU2 314 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 ANKRD9Q96BM1 317 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-216ENST00000639167 BPIFA2Q96DR5 249 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 CCDC3Q9BQI4 270 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 ALG8Q9BVK2 526 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 TWSG1Q9GZX9 223 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 FAM60AQ9NP50 221 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 MEPEQ9NQ76 525 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-216ENST00000639167 ZNF221Q9UK13 617 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 SATB2Q9UPW6 733 aa9.82□□□□□ -0.84
NECAP1-216ENST00000639167 MEIOCA2RUB1 952 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 J3QRE1 110 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 PLA2G10O15496 165 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 RNF13O43567 381 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 BRINP1O60477 761 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 ADAM11O75078 769 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 CBX7O95931 251 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 TNFP01375 233 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 GABRG2P18507 467 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 ASAH1Q13510 395 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 IL18Q14116 193 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 AMZ1Q400G9 498 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 TMEM53Q6P2H8 277 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 RNF44Q7L0R7 432 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 TAF8Q7Z7C8 310 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 GID4Q8IVV7 300 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 CDK20Q8IZL9 346 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 ACBD7Q8N6N7 88 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 CYB561A3Q8NBI2 242 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 SLC37A3Q8NCC5 494 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 GALNT6Q8NCL4 622 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 OR4N2Q8NGD1 307 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 OR6F1Q8NGZ6 308 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 DNAJA4Q8WW22 397 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-216ENST00000639167 RSC1A1Q92681 617 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 PTP4A1Q93096 173 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 EFHD2Q96C19 240 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-216ENST00000639167 ZNF486Q96H40 463 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-216ENST00000639167 SENP5Q96HI0 755 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-216ENST00000639167 DMRTB1Q96MA1 342 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 STACQ99469 402 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 CTRCQ99895 268 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 SLC22A4Q9H015 551 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 RNF32Q9H0A6 362 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 FLRT3Q9NZU0 649 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 FBXL4Q9UKA2 621 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 KNL1Q8NG31 2342 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 DAPL1A0PJW8 107 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 PRR23D1E9PI22 279 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-216ENST00000639167 E9PI62 339 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 GNB5O14775 395 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 OR10H2O60403 315 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 PPP1R3DO95685 299 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 SEMA4FO95754 770 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 GYPBP06028 91 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 PRR23D2P0DMB1 279 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-216ENST00000639167 ST6GAL1P15907 406 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 VAMP1P23763 118 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 BMP8BP34820 402 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 HOXD12P35452 270 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 EMDP50402 254 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 YPEL5P62699 121 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 UBE2IP63279 158 aaKnown RBP9.81□□□□□ -0.84
NECAP1-216ENST00000639167 FOXK2Q01167 660 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 ACSM1Q08AH1 577 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 ADAM15Q13444 863 aa9.81□□□□□ -0.84
NECAP1-216ENST00000639167 PRPF38BQ5VTL8 546 aaKnown RBP9.81□□□□□ -0.84
NECAP1-216ENST00000639167 BMP8AQ7Z5Y6 402 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms