RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SDC3O75056 442 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 CDRT1O95170 752 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 RCBTB2O95199 551 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 ACAA2P42765 397 aaKnown RBP19.87■□□□□ 0.77
CLN6-224ENST00000638076 NNATQ16517 81 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 GARNL3Q5VVW2 1013 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 ZFP41Q8N8Y5 198 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 NACC2Q96BF6 587 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 SECISBP2Q96T21 854 aaKnown RBP19.87■□□□□ 0.77
CLN6-224ENST00000638076 FOXQ1Q9C009 403 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 ERVK-19Q9WJR5 959 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 UGT2A1Q9Y4X1 527 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 PCDHGB6Q9Y5F9 930 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 RGS5O15539 181 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 PRAMEF2O60811 474 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 GPR3P46089 330 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 TGM4P49221 684 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 FNTBP49356 437 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 RPL6Q02878 288 aaKnown RBP19.86■□□□□ 0.77
CLN6-224ENST00000638076 COL13A1Q5TAT6 717 aaPredicted RBP19.86■□□□□ 0.77
CLN6-224ENST00000638076 B3GLCTQ6Y288 498 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 THSD4Q6ZMP0 1018 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 LNX2Q8N448 690 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 ABHD8Q96I13 439 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 TM9SF2Q99805 663 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 ZNF649Q9BS31 505 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 EVA1AQ9H8M9 152 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 MED20Q9H944 212 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 PDE7BQ9NP56 450 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 SIGLEC7Q9Y286 467 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 CAB39Q9Y376 341 aaPredicted RBP19.86■□□□□ 0.77
CLN6-224ENST00000638076 LALBAP00709 142 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 IGHA1P01876 353 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 GUSBP08236 651 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 CTBP2P56545 445 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 CRTC2Q53ET0 693 aaPredicted RBP19.86■□□□□ 0.77
CLN6-224ENST00000638076 NKAIN2Q5VXU1 208 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 RPL13AP3Q6NVV1 102 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 C17orf82Q86X59 251 aaPredicted RBP19.86■□□□□ 0.77
CLN6-224ENST00000638076 GID4Q8IVV7 300 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 SIRT6Q8N6T7 355 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 CADM4Q8NFZ8 388 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 OR51Q1Q8NH59 317 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 C16orf52Q8NHV5 167 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 IFT27Q9BW83 186 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 SPRTNQ9H040 489 aaPredicted RBP19.86■□□□□ 0.77
CLN6-224ENST00000638076 Q9N2J8 555 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.86■□□□□ 0.77
CLN6-224ENST00000638076 ERVK13-1Q9NX77 482 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 TNFRSF10DQ9UBN6 386 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 ZNF229Q9UJW7 825 aa19.86■□□□□ 0.77
CLN6-224ENST00000638076 TRAV27A0A087WT01 109 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 TLCD2A6NGC4 264 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 SLC30A4O14863 429 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 IFNA16P05015 189 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 CT45A8P0DMV1 189 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 CT45A9P0DMV2 189 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 TNFSF8P32971 234 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 CT45A2Q5DJT8 189 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 KLHL36Q8N4N3 616 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 PSD4Q8NDX1 1056 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 OR51G2Q8NGK0 314 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 SLC25A46Q96AG3 418 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 NEURL2Q9BR09 285 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 SLC30A2Q9BRI3 323 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 OR10A5Q9H207 317 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 THADAQ6YHU6 1953 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 IL1AP01583 271 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 FOXK2Q01167 660 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 RUNX1T1Q06455 604 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 ZNF791Q3KP31 576 aaPredicted RBP19.85■□□□□ 0.77
CLN6-224ENST00000638076 ALG10BQ5I7T1 473 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 POC5Q8NA72 575 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 OR51A7Q8NH64 312 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 TRIM2Q9C040 744 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 FN3KQ9H479 309 aa19.85■□□□□ 0.77
CLN6-224ENST00000638076 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.84■□□□□ 0.77
CLN6-224ENST00000638076 ZC3H12DA2A288 527 aaKnown RBP19.84■□□□□ 0.77
CLN6-224ENST00000638076 ZNF749O43361 778 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 PAICSP22234 425 aaKnown RBP19.84■□□□□ 0.77
CLN6-224ENST00000638076 GABRA5P31644 462 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 HSD17B7P56937 341 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 HNRNPKP61978 463 aaKnown RBP eCLIP19.84■□□□□ 0.77
CLN6-224ENST00000638076 FGFBP1Q14512 234 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 SMAD2Q15796 467 aaKnown RBP19.84■□□□□ 0.77
CLN6-224ENST00000638076 ZNF141Q15928 474 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 TCTE1Q5JU00 501 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 NIPAL3Q6P499 406 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 CHRDL2Q6WN34 429 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 QSOX2Q6ZRP7 698 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 HSPA12BQ96MM6 686 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 KCTD7Q96MP8 289 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 CHRDQ9H2X0 955 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 MRPS17Q9Y2R5 130 aaKnown RBP19.84■□□□□ 0.77
CLN6-224ENST00000638076 OR10H1Q9Y4A9 318 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 LAMA1P25391 3075 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 LMO7DNF2Z398 122 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 NGFRP08138 427 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 CLEC2LP0C7M8 214 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 MSL3P1P0C860 447 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms