RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 IL12RB2Q99665 862 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 RBBP8Q99708 897 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 HOPXQ9BPY8 73 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 TMEM79Q9BSE2 394 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 TIMM29Q9BSF4 260 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 NDC1Q9BTX1 674 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 FUCA2Q9BTY2 467 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 TMEM109Q9BVC6 243 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 GPR174Q9BXC1 333 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 C1QTNF7Q9BXJ2 289 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ULBP1Q9BZM6 244 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 UCK2Q9BZX2 261 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PORCNQ9H237 461 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SPNS1Q9H2V7 528 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 FAM124BQ9H5Z6 455 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 ZDHHC6Q9H6R6 413 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CXorf36Q9H7Y0 433 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ZNF430Q9H8G1 570 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 C10orf88Q9H8K7 445 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 TBC1D17Q9HA65 648 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SLC28A3Q9HAS3 691 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 UGT1A10Q9HAW8 530 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ANKHQ9HCJ1 492 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 BPIFA1Q9NP55 256 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 FZD3Q9NPG1 666 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 KRCC1Q9NPI7 259 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 PRSS16Q9NQE7 514 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ENTPD7Q9NQZ7 604 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 POLE4Q9NR33 117 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 DUSP22Q9NRW4 184 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CYSLTR2Q9NS75 346 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 FAIMQ9NVQ4 179 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 RMND1Q9NWS8 449 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 TEX10Q9NXF1 929 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 GPR83Q9NYM4 423 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ZNF282Q9UDV7 671 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 MRPS17Q9Y2R5 130 aaKnown RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 ARL2BPQ9Y2Y0 163 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 FAM96BQ9Y3D0 163 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 ALG6Q9Y672 507 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CLIC4Q9Y696 253 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CSNK1G3Q9Y6M4 447 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PBRM1Q86U86 1689 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SNED1Q8TER0 1413 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 NID2Q14112 1375 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 RTL9Q8NET4 1388 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ANKRD30BQ9BXX2 1392 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ZMYM6O95789 1325 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 KCNE1BA0A087WTH5 132 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TEX13DA0A0J9YY54 714 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 KBTBD11-OT1A0A1B0GTJ5 212 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 A0A1B0GV72 72 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 A0A1B0GV90 55 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SH3PXD2BA1X283 911 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 E9PAM4 449 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CLDN34H7C241 214 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 hCG_2039718K7EN88 272 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 M0R036 132 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 BTN3A3O00478 584 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ZBTB5O15062 677 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 MAGEB4O15481 346 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 AIREO43918 545 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 MGRN1O60291 552 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 FADS1O60427 444 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TPST2O60704 377 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 RAMP3O60896 148 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PRKRAO75569 313 aaKnown RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 RGS11O94810 467 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TOX4O94842 621 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 AP2A2O94973 939 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CTDNEP1O95476 244 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 LDOC1O95751 146 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 GH2P01242 217 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 GASTP01350 101 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 IFNA2P01563 188 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 IFNA21P01568 189 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PPBPP02775 128 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CSN3P07498 182 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ATXN1LP0C7T5 689 aaKnown RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 ZNF12P17014 697 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TCP1P17987 556 aaKnown RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 IGFBP5P24593 272 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 MPZP25189 248 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ELK4P28324 431 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 HTR2CP28335 458 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 GABRR2P28476 465 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TIMP3P35625 211 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 GPX4P36969 197 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 RPS19P39019 145 aaKnown RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 BTDP43251 543 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CRYBB2P43320 205 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 RFX3P48380 749 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 IDH2P48735 452 aaKnown RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 LHX1P48742 406 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CYB561P49447 251 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ACOT2P49753 483 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TNFSF10P50591 281 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ZNF134P52741 427 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 AP2S1P53680 142 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 PLA2G16P53816 162 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms