RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ME2P23368 584 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 IL32P24001 234 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 NTF4P34130 210 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 GPC1P35052 558 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 IRX1P78414 480 aaPredicted RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 CKAP4Q07065 602 aaKnown RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 ITGADQ13349 1161 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 RNPS1Q15287 305 aaKnown RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 FAM153CQ494X1 144 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 VPS26BQ4G0F5 336 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 GTF2IRD2BQ6EKJ0 949 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 PODNL1Q6PEZ8 512 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 LRIG3Q6UXM1 1119 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 BHLHA15Q7RTS1 189 aaPredicted RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 GTF2IRD2Q86UP8 949 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 BANPQ8N9N5 519 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 ATP6V1C2Q8NEY4 427 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 OR10H5Q8NGA6 315 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 CEP70Q8NHQ1 597 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 KISS1RQ969F8 398 aaPredicted RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 CPNE4Q96A23 557 aaPredicted RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 FAM120BQ96EK7 910 aaKnown RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 MS4A4EQ96PG1 132 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 TSSK3Q96PN8 268 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 ZNF300Q96RE9 604 aaPredicted RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 TXLNGYQ9BZA5 131 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 GRIP2Q9C0E4 1043 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 TSPYL1Q9H0U9 437 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 LRTM1Q9HBL6 345 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 RRAGDQ9NQL2 400 aaPredicted RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 C1orf109Q9NX04 203 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 CISD1Q9NZ45 108 aaKnown RBP9.77□□□□□ -0.85
DDX41-218ENST00000625286 SH3BP4Q9P0V3 963 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 GIMAP2Q9UG22 337 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 TBK1Q9UHD2 729 aa9.77□□□□□ -0.85
DDX41-218ENST00000625286 ARFGEF3Q5TH69 2177 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 E7EQL1 145 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 SCDO00767 359 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 SMAD9O15198 467 aaKnown RBP9.76□□□□□ -0.85
DDX41-218ENST00000625286 PHF1O43189 567 aaPredicted RBP9.76□□□□□ -0.85
DDX41-218ENST00000625286 SSX4O60224 188 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 URI1O94763 535 aaPredicted RBP9.76□□□□□ -0.85
DDX41-218ENST00000625286 H6PDO95479 791 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 HMGN2P05204 90 aaKnown RBP9.76□□□□□ -0.85
DDX41-218ENST00000625286 GSTA1P08263 222 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 ALOX5P09917 674 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 LINC00032P0C843 101 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 UROSP10746 265 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 MYL2P10916 166 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 IGHV1-2P23083 117 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 LCN1P31025 176 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 EIF1P41567 113 aaKnown RBP9.76□□□□□ -0.85
DDX41-218ENST00000625286 OR3A2P47893 321 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 DNAJB13P59910 316 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 POU6F2P78424 691 aaPredicted RBP9.76□□□□□ -0.85
DDX41-218ENST00000625286 SPOCK1Q08629 439 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 P2RY6Q15077 328 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 UGT3A2Q3SY77 523 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 PDSS1Q5T2R2 415 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 C11orf71Q6IPW1 123 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 Q6ZT83 130 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 SZRD1Q7Z422 152 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 TDRPQ86YL5 185 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 MISPQ8IVT2 679 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 COX18Q8N8Q8 333 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 PHOSPHO1Q8TCT1 267 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 ACMSDQ8TDX5 336 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 PPCDCQ96CD2 204 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 CCT7Q99832 543 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 BTBD2Q9BX70 525 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 POTEKPQ9BYX7 375 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 BCO1Q9HAY6 547 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 GP6Q9HCN6 339 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 FANCFQ9NPI8 374 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 ACSS1Q9NUB1 689 aaPredicted RBP9.76□□□□□ -0.85
DDX41-218ENST00000625286 DCDC2Q9UHG0 476 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 KCNE5Q9UJ90 142 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 ACTL7BQ9Y614 415 aa9.76□□□□□ -0.85
DDX41-218ENST00000625286 GOLGA8QA0A0J9YX86 632 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 CENPVL1A0A0U1RR11 272 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 FAM234BA2RU67 622 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 GOLGA8OA6NCC3 632 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 A8MV72 311 aaPredicted RBP9.75□□□□□ -0.85
DDX41-218ENST00000625286 GOLGA8NF8WBI6 632 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 ETV2O00321 342 aaPredicted RBP9.75□□□□□ -0.85
DDX41-218ENST00000625286 LSM1O15116 133 aaKnown RBP9.75□□□□□ -0.85
DDX41-218ENST00000625286 PLIN3O60664 434 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 PGM3O95394 542 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 TP53P04637 393 aaPredicted RBP9.75□□□□□ -0.85
DDX41-218ENST00000625286 PABPC4LP0CB38 370 aaKnown RBP9.75□□□□□ -0.85
DDX41-218ENST00000625286 LAMP1P11279 417 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 BCKDHAP12694 445 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 ELK4P28324 431 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 SERPINB4P48594 390 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 P2RX1P51575 399 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 FOXG1P55316 489 aaPredicted RBP9.75□□□□□ -0.85
DDX41-218ENST00000625286 RAC3P60763 192 aa9.75□□□□□ -0.85
DDX41-218ENST00000625286 SRSF2Q01130 221 aaKnown RBP9.75□□□□□ -0.85
DDX41-218ENST00000625286 LASP1Q14847 261 aaKnown RBP9.75□□□□□ -0.85
DDX41-218ENST00000625286 PPA1Q15181 289 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms