RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TTC36A6NLP5 189 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 H3BMH7 237 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 TAF4O00268 1085 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 WWP2O00308 870 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 KPNA4O00629 521 aaPredicted RBP18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 BHLHE40O14503 412 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 ADAM11O75078 769 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 RCBTB2O95199 551 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 LIMS3P0CW19 117 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 LIMS4P0CW20 117 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 BMP7P18075 431 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 FUT1P19526 365 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 BNC1Q01954 994 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 CBX3Q13185 183 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 LSMEM1Q8N8F7 131 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 GRHL3Q8TE85 626 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 ARSGQ96EG1 525 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 AHCYL2Q96HN2 611 aaKnown RBP18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 ZNF426Q9BUY5 554 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 ASPNQ9BXN1 380 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 MEPEQ9NQ76 525 aaPredicted RBP18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 HINT3Q9NQE9 182 aaKnown RBP18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 ENAMQ9NRM1 1142 aa18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 EXOGQ9Y2C4 368 aaKnown RBP18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 TP53BP1Q12888 1972 aaPredicted RBP18.2■□□□□ 0.5
PCDHB11-202ENST00000624887 IFNA16P05015 189 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 ATP12AP54707 1039 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 PSMD4P55036 377 aaKnown RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 KCNAB1Q14722 419 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 OR2G6Q5TZ20 316 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 SHFQ7M4L6 423 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 BMP8AQ7Z5Y6 402 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 LSRQ86X29 649 aaPredicted RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 CARFQ8N187 725 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 BBS1Q8NFJ9 593 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 TRMT61AQ96FX7 289 aaKnown RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 PTCHD1Q96NR3 888 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 FN3KQ9H479 309 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 SIAEQ9HAT2 523 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 SSR3Q9UNL2 185 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 SIGLEC7Q9Y286 467 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 PEX16Q9Y5Y5 336 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 IGHV1OR21-1A0A087WYE8 117 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 ZNF670-ZNF695F2Z2N8 137 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 NUDT21O43809 227 aaKnown RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 S100A5P33763 92 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 RBM34P42696 430 aaKnown RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 AFF3P51826 1226 aaKnown RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 OR1D5P58170 312 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 ZNF550Q7Z398 422 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 CPOQ8IVL8 374 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 CMIPQ8IY22 773 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 LNX2Q8N448 690 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 SNRNP27Q8WVK2 155 aaKnown RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 TM9SF4Q92544 642 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 MROQ9BYG7 248 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 ENKD1Q9H0I2 346 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 CUTCQ9NTM9 273 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 H2AFY2Q9P0M6 372 aaPredicted RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 PRODH2Q9UF12 536 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 SPIN1Q9Y657 262 aaPredicted RBP18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 MAU2Q9Y6X3 613 aa18.19■□□□□ 0.5
PCDHB11-202ENST00000624887 EML5Q05BV3 1969 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 RFPL3O75679 317 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 OR2B3O76000 313 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 CLPSP04118 112 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 SLC1A3P43003 542 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 TPBGQ13641 420 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 DSG2Q14126 1118 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 OXA1LQ15070 435 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 SMARCD3Q6STE5 483 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 CXXC5Q7LFL8 322 aaKnown RBP18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 LAPTM4BQ86VI4 370 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 SNX29P2Q8IUI4 249 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 GID4Q8IVV7 300 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 BCORP1Q8N888 145 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 ZNF485Q8NCK3 441 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 OR4F15Q8NGB8 312 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 OR13C2Q8NGS9 318 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 GATAD2BQ8WXI9 593 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 ARHGAP9Q9BRR9 750 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 LANCL2Q9NS86 450 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 OR10H1Q9Y4A9 318 aa18.18■□□□□ 0.5
PCDHB11-202ENST00000624887 BCAT2O15382 392 aaPredicted RBP18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 HYAL3O43820 417 aaPredicted RBP18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 IGHA1P01876 353 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 TSPAN19P0C672 248 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 SAGP10523 405 aaPredicted RBP18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 HSD11B2P80365 405 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 NNATQ16517 81 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 ALG10BQ5I7T1 473 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 PERM1Q5SV97 790 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 MED25Q71SY5 747 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 ITPKCQ96DU7 683 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 DAPK2Q9UIK4 370 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 SIT1Q9Y3P8 196 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 A0A075B6Q4 140 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 SOCS6O14544 535 aa18.17■□□□□ 0.5
PCDHB11-202ENST00000624887 PTP4A3O75365 173 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms