RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 SNRNP70P08621 437 aaKnown RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 ETFAP13804 333 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 MPLP40238 635 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 ERVK-8P63133 956 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 OR8G1Q15617 311 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 USF2Q15853 346 aaPredicted RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 PODNL1Q6PEZ8 512 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 PQLC1Q8N2U9 271 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 MRPL43Q8N983 215 aaKnown RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 TRUB1Q8WWH5 349 aaKnown RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 NICN1Q9BSH3 213 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 ISYNA1Q9NPH2 558 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 MYH8P13535 1937 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 SPATA31D1Q6ZQQ2 1576 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 LRRC3CA6NJW4 275 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 AGAP14A8MT82 685 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 COCHO43405 550 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 ABHD2P08910 425 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 EBLN1P0CF75 366 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 GTF2F2P13984 249 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 KCNE1P15382 129 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 HSD17B12Q53GQ0 312 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 UBE2UQ5VVX9 321 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 ZCCHC23Q6ZST2 131 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 CDRT4Q8N9R6 151 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 RANBP3Q9H6Z4 567 aaPredicted RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 TAS2R8Q9NYW2 309 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 DNAJC27Q9NZQ0 273 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 SETBP1Q9Y6X0 1596 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 TRBC2A0A5B9 178 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 SLC22A31A6NKX4 558 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 J3QRK9 145 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 CXCR6O00574 342 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 OR4F21O95013 312 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 RPS2P15880 293 aaKnown RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 C1orf210Q8IVY1 113 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 C12orf49Q9H741 205 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 MYOZ1Q9NP98 299 aaPredicted RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 TREM1Q9NP99 234 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 FABP12A6NFH5 140 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 MTX2O75431 263 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 FABP6P51161 128 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 HBG1P69891 147 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 HBG2P69892 147 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 P2RY14Q15391 338 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 PTCHD3Q3KNS1 767 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 USP43Q70EL4 1123 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 VWA5B2Q8N398 1253 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 RNF148Q8N7C7 305 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 REEP4Q9H6H4 257 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 PELI2Q9HAT8 420 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 SEC14L6B5MCN3 397 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 CLIC1O00299 241 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 SC5DO75845 299 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 T-ENOLP0DO92 83 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 POU3F3P20264 500 aaPredicted RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 ACVR1BP36896 505 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 TAF9Q16594 264 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 NRF1Q16656 503 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 TSEN54Q7Z6J9 526 aaKnown RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 PIGCQ92535 297 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 RND1Q92730 232 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 FCRL3Q96P31 734 aaPredicted RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 ZNF251Q9BRH9 671 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 SLC25A31Q9H0C2 315 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 TUBA4BQ9H853 241 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 EXOSC1Q9Y3B2 195 aaKnown RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 NPFFR2Q9Y5X5 522 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 hCG_1818297A0A087WSY0 165 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 WTIPA6NIX2 430 aaPredicted RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 PSMG1O95456 288 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 S100A4P26447 101 aaKnown RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 MLLT10P55197 1068 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 CRYZQ08257 329 aaKnown RBP5.92□□□□□ -1.46
CDKL5-205ENST00000623535 RAB41Q5JT25 222 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 PSAPL1Q6NUJ1 521 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 NYAP1Q6ZVC0 841 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 KIF2BQ8N4N8 673 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 SCAMP5Q8TAC9 235 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 GIMAP1Q8WWP7 306 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 BTF3L4Q96K17 158 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 FCRL5Q96RD9 977 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 FUCA2Q9BTY2 467 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 SLC17A6Q9P2U8 582 aa5.92□□□□□ -1.46
CDKL5-205ENST00000623535 TUBAL3A6NHL2 446 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 STATHP02808 62 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 NFYBP25208 207 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 TGM4P49221 684 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 CYCSP99999 105 aaKnown RBP5.91□□□□□ -1.46
CDKL5-205ENST00000623535 GGNBP1Q5YKI7 109 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 C3orf58Q8NDZ4 430 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 OR10A6Q8NH74 314 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 NFKBIEO00221 500 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 TUSC2O75896 110 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 EPOP01588 193 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 EDNRBP24530 442 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 NMBRP28336 390 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 C17orf67Q0P5P2 114 aa5.91□□□□□ -1.46
CDKL5-205ENST00000623535 TMEM230Q96A57 120 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms