RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 POM121L1PQ3SYA9 428 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 FAM69AQ5T7M9 428 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 ALKAL2Q6UX46 152 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 BAIAP2L2Q6UXY1 529 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 MBOAT2Q6ZWT7 520 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 GDF7Q7Z4P5 450 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 UBE3DQ7Z6J8 389 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 NPAS4Q8IUM7 802 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 SLC44A3Q8N4M1 653 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 CNOT9Q92600 299 aaKnown RBP13.12□□□□□ -0.31
LDB3-209ENST00000623056 C4orf36Q96KX1 117 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 OR2AG1Q9H205 316 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 HRASLSQ9HDD0 168 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 SLC35C2Q9NQQ7 365 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 TAC3Q9UHF0 121 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 CA5BQ9Y2D0 317 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 GLOD5A6NK44 160 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 MCRIP1C9JLW8 97 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 TEX46H3BTG2 121 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 J3QLW9 94 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 ARPC1BO15143 372 aaKnown RBP13.12□□□□□ -0.31
LDB3-209ENST00000623056 NDUFS4O43181 175 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 PRKRAO75569 313 aaKnown RBP13.12□□□□□ -0.31
LDB3-209ENST00000623056 B3GALNT1O75752 331 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 EFEMP2O95967 443 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 PROS1P07225 676 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 MRPL3P09001 348 aaKnown RBP13.12□□□□□ -0.31
LDB3-209ENST00000623056 FGF2P09038 288 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 GIPP09681 153 aaPredicted RBP13.12□□□□□ -0.31
LDB3-209ENST00000623056 ZNF19P17023 458 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 RECQLP46063 649 aaPredicted RBP13.12□□□□□ -0.31
LDB3-209ENST00000623056 ANXA11P50995 505 aaKnown RBP13.12□□□□□ -0.31
LDB3-209ENST00000623056 TAS2R38P59533 333 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 HTR4Q13639 388 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 MAPK14Q16539 360 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 LINC00518Q8N0U6 118 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 SPICQ8N5J4 248 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 TEX19Q8NA77 164 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 BVESQ8NE79 360 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 WDR89Q96FK6 387 aaPredicted RBP13.12□□□□□ -0.31
LDB3-209ENST00000623056 AIF1LQ9BQI0 150 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 DPH7Q9BTV6 452 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 SLC7A5P2Q9GIP4 190 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 SLC38A1Q9H2H9 487 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 EPHX3Q9H6B9 360 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 MCCC2Q9HCC0 563 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 PRKAB1Q9Y478 270 aa13.12□□□□□ -0.31
LDB3-209ENST00000623056 MID1O15344 667 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 ACADLP28330 430 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 PRPF38BQ5VTL8 546 aaKnown RBP13.11□□□□□ -0.31
LDB3-209ENST00000623056 SLC25A25Q6KCM7 469 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 C17orf64Q86WR6 236 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 GHSRQ92847 366 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 GCDHQ92947 438 aaPredicted RBP13.11□□□□□ -0.31
LDB3-209ENST00000623056 SLC41A3Q96GZ6 507 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 BBS4Q96RK4 519 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 IFT27Q9BW83 186 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 ZDHHC5Q9C0B5 715 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 INPP5EQ9NRR6 644 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 OBSL1O75147 1896 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 TRAV1-2A0A0B4J238 106 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
LDB3-209ENST00000623056 PDCD5O14737 125 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 PPM1DO15297 605 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 GATBO75879 557 aaKnown RBP13.11□□□□□ -0.31
LDB3-209ENST00000623056 WDPCPO95876 746 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 ELFN1P0C7U0 828 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
LDB3-209ENST00000623056 NTSP30990 170 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 EPHB3P54753 998 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 RGS8P57771 180 aaPredicted RBP13.11□□□□□ -0.31
LDB3-209ENST00000623056 OR12D2P58182 307 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 TAS2R43P59537 309 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 HLXQ14774 488 aaPredicted RBP13.11□□□□□ -0.31
LDB3-209ENST00000623056 OR5M10Q6IEU7 315 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 DPPA4Q7L190 304 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 LINGO2Q7L985 606 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 C11orf96Q7Z7L8 435 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 OR5AR1Q8NGP9 310 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 OR5J2Q8NH18 312 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 SCARB1Q8WTV0 552 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 SMAP2Q8WU79 429 aaPredicted RBP13.11□□□□□ -0.31
LDB3-209ENST00000623056 MCHR1Q99705 422 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 TMPRSS13Q9BYE2 586 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 SPG21Q9NZD8 308 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 ZNF69Q9UC07 566 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 FBXL2Q9UKC9 423 aa13.11□□□□□ -0.31
LDB3-209ENST00000623056 OR2M5A3KFT3 312 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 CDHR4A6H8M9 788 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 FLRT2O43155 660 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 SUSD5O60279 629 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 GALR3O60755 368 aaPredicted RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 ASGR2P07307 311 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ADRB1P08588 477 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 FUT1P19526 365 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 SLC16A1P53985 500 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms