RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 EXO5Q9H790 373 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 GID8Q9NWU2 228 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 CMTM6Q9NX76 183 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 GMPR2Q9P2T1 348 aaKnown RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 SLC35A3Q9Y2D2 325 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 GPC6Q9Y625 555 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 LRRK2Q5S007 2527 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 TRGV8A0A0C4DH27 118 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 OR2M5A3KFT3 312 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 CDHR4A6H8M9 788 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 TMEM247A6NEH6 219 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 ETV2O00321 342 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 EPPINO95925 133 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 DBIP07108 87 aaKnown RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 PABPC4LP0CB38 370 aaKnown RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 ETS2P15036 469 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 CPA2P48052 419 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 STARP49675 285 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 LHX2P50458 406 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 NUDT2P50583 147 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 CRYBA2P53672 197 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 SUMO3P55854 103 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 GNA13Q14344 377 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 CYP51A1Q16850 503 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 RNF220Q5VTB9 566 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 HACD2Q6Y1H2 254 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 NCCRP1Q6ZVX7 275 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 SLC15A3Q8IY34 581 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 PEX5LQ8IYB4 626 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 CCDC197Q8NCU1 140 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 FBXO27Q8NI29 283 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 BBS10Q8TAM1 723 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 BCAS4Q8TDM0 211 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 ABTB1Q969K4 478 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 RELTQ969Z4 430 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 WDYHV1Q96HA8 205 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 PRDM14Q9GZV8 571 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 PIF1Q9H611 641 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 EFCAB1Q9HAE3 211 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 HHATLQ9HCP6 504 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF443Q9Y2A4 671 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-217ENST00000621474 FAM215AQ9Y5M1 114 aa12.95□□□□□ -0.34
CBWD3-217ENST00000621474 MPDZO75970 2070 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 C7orf72A4D263 438 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 CCT8L1PA6NM43 557 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 KDM4EB2RXH2 506 aaPredicted RBP12.94□□□□□ -0.34
CBWD3-217ENST00000621474 GTPBP1O00178 669 aaKnown RBP12.94□□□□□ -0.34
CBWD3-217ENST00000621474 BCKDKO14874 412 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 LRRTM2O43300 516 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 NTN1O95631 604 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 ACTL6AO96019 429 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 THBS1P07996 1170 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 PRKCAP17252 672 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 CHMP24386 653 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 AQP1P29972 269 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 CLDN15P56746 228 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 CLDN18P56856 261 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 KCNC4Q03721 635 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 RBBP4Q09028 425 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 GLYR1Q49A26 553 aaPredicted RBP12.94□□□□□ -0.34
CBWD3-217ENST00000621474 C4orf17Q53FE4 359 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 RAET1LQ5VY80 246 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 RTL6Q6ICC9 239 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 FJX1Q86VR8 437 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 CMIPQ8IY22 773 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 CLIP4Q8N3C7 705 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 MARVELD2Q8N4S9 558 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 C11orf65Q8NCR3 313 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 HIPK4Q8NE63 616 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 TOR1AIP2Q8NFQ8 470 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 OR5W2Q8NH69 310 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 SFXN2Q96NB2 322 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 SH3GL1Q99961 368 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 EXOSC3Q9NQT5 275 aaKnown RBP12.94□□□□□ -0.34
CBWD3-217ENST00000621474 ACAD8Q9UKU7 415 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF337Q9Y3M9 751 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 DOPEY2Q9Y3R5 2298 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 DOCK7Q96N67 2140 aa12.94□□□□□ -0.34
CBWD3-217ENST00000621474 SPTBN1Q01082 2364 aaKnown RBP12.94□□□□□ -0.34
CBWD3-217ENST00000621474 DOPEY1Q5JWR5 2465 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 MED12LQ86YW9 2145 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 NBPF19A0A087WUL8 3843 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 A0A087WZY1 265 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 H0YC42 278 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 NME4O00746 187 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 NDUFAB1O14561 156 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 PRRG2O14669 202 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 EFNA2O43921 213 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF708P17019 499 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 IL11P20809 199 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 PCGF2P35227 344 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 TPD52P55327 224 aaPredicted RBP12.93□□□□□ -0.34
CBWD3-217ENST00000621474 FOXF1Q12946 379 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 VMACQ2NL98 169 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 GLIPR1L2Q4G1C9 344 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 LIN52Q52LA3 116 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 GRAMD2AQ8IUY3 354 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 GTPBP8Q8N3Z3 284 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms