RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TMEM221A6NGB7 291 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 M0R296 226 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TYROBPO43914 113 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 KNG1P01042 644 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CDK4P11802 303 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CKMT1AP12532 417 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 S100A11P31949 105 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SHMT2P34897 504 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 RPS19P39019 145 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 DAOAP59103 153 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 GUK1Q16774 197 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 MICAQ29983 383 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM244Q5VVB8 128 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF551Q7Z340 670 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 LRRC56Q8IYG6 542 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 BOLLQ8N9W6 283 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 DDIT4LQ96D03 193 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF582Q96NG8 517 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 HBEGFQ99075 208 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TXNRD2Q9NNW7 524 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ACSS2Q9NR19 701 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 RBFOX1Q9NWB1 397 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SYT7O43581 403 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SOCS5O75159 536 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SERPINA5P05154 406 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ARSBP15848 533 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 DDOSTP39656 456 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SLC6A8P48029 635 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 DAP3P51398 398 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 LIMK1P53667 647 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 GPR50Q13585 617 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 VEZF1Q14119 521 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ANKLE1Q8NAG6 615 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 OR1M1Q8NGA1 313 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 YIPF5Q969M3 257 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ANKRD9Q96BM1 317 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 FAM46AQ96IP4 442 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 NTN4Q9HB63 628 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 IL36AQ9UHA7 158 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 MT-CYBP00156 380 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CSTAP01040 98 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CT45A6P0DMU7 189 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CT45A5P0DMU8 189 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CT45A7P0DMV0 189 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CT45A8P0DMV1 189 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CT45A9P0DMV2 189 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 HLA-FP30511 346 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 RPS15P62841 145 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TEAD2Q15562 447 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CT45A2Q5DJT8 189 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CT45A1Q5HYN5 189 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 GDPD4Q6W3E5 623 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CLDN22Q8N7P3 220 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CT45A3Q8NHU0 189 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 RPL10LQ96L21 214 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SUV39H2Q9H5I1 410 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 PLEKHJ1Q9NW61 149 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SUSD2Q9UGT4 822 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SLC22A14Q9Y267 594 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TCRBV7S2A1N4TA0A589 114 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 GRXCR1A8MXD5 290 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 C1GALT1C1LP0DN25 315 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 DRD5P21918 477 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TM4SF4P48230 202 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 NDUFA6P56556 154 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ARL16Q0P5N6 197 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 KIAA0141Q14154 515 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 PAFAH1B3Q15102 231 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 YIF1BQ5BJH7 314 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CD276Q5ZPR3 534 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SLC43A2Q8N370 569 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF561Q8N587 486 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 OR5L2Q8NGL0 311 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM74Q96NL1 305 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 RANBP9Q96S59 729 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SLC25A21Q9BQT8 299 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 EDEM2Q9BV94 578 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 RYDENQ9NUL5 291 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 OR6C2Q9NZP2 312 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 NALCNQ8IZF0 1738 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CNOT4O95628 575 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CER1O95813 267 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 MAS1P04201 325 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 MRPL3P09001 348 aaKnown RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 PRKACGP22612 351 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CASP3P42574 277 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 FASLGP48023 281 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SULT1A2P50226 295 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CLDN8P56748 225 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SORDQ00796 357 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CATR1Q13166 79 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CDK5R2Q13319 367 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 HNF4GQ14541 408 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 CES4AQ5XG92 561 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 PSAPL1Q6NUJ1 521 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 KDM8Q8N371 416 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 OR4K15Q8NH41 348 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SPRYD4Q8WW59 207 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SLAMF9Q96A28 289 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 MIB2Q96AX9 1013 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms