RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 PBX2P40425 430 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 OR1Q1Q15612 314 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 NKPD1Q17RQ9 610 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 PAGE3Q5JUK9 113 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 ENTPD8Q5MY95 495 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 LCN8Q6JVE9 175 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 C6orf15Q6UXA7 325 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-219ENST00000620786 TEX19Q8NA77 164 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 C22orf15Q8WYQ4 148 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 AMDHD1Q96NU7 426 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 FGF21Q9NSA1 209 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 CSNK1G3Q9Y6M4 447 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 TLCD2A6NGC4 264 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 LRRTM2O43300 516 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 HSD17B1P14061 328 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 NPR2P20594 1047 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 GABRR1P24046 479 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 C14orf28Q4W4Y0 310 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 ESX1Q8N693 406 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 CXXC1Q9P0U4 656 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-219ENST00000620786 WIF1Q9Y5W5 379 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 MPIG6BO95866 241 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 DBHP09172 617 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 CAPN3P20807 821 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 Q8N402 240 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 CCDC71LQ8N9Z2 235 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 CCDC74AQ96AQ1 378 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF775Q96BV0 537 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF597Q96LX8 424 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 ASB16Q96NS5 453 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 TREX2Q9BQ50 279 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-219ENST00000620786 CALHM2Q9HA72 323 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-219ENST00000620786 C2orf72A6NCS6 295 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 YES1P07947 543 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 RGS6P49758 472 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 CLDN17P56750 224 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 ADARB1P78563 741 aaKnown RBP10.66□□□□□ -0.7
CLIP1-219ENST00000620786 RUNDC3AQ59EK9 446 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 SLC16A14Q7RTX9 510 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 OR11L1Q8NGX0 322 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 OR5W2Q8NH69 310 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 MMP27Q9H306 513 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 C6orf106Q9H6K1 298 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-219ENST00000620786 PLEKHA3Q9HB20 300 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 GHRLQ9UBU3 117 aa10.66□□□□□ -0.7
CLIP1-219ENST00000620786 LOC105369274A0A096LPK9 316 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 AGAP5A6NIR3 686 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 KLRC4-KLRK1H3BQV0 150 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 TIMM8AO60220 97 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-219ENST00000620786 SLC16A7O60669 478 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 C7P10643 843 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 S100A2P29034 98 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 MOGSQ13724 837 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 PTPRRQ15256 657 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF423Q2M1K9 1284 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 RNASE10Q5GAN6 216 aaKnown RBP10.65□□□□□ -0.7
CLIP1-219ENST00000620786 NIPAL3Q6P499 406 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 RFLNAQ6ZTI6 216 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 TECPR1Q7Z6L1 1165 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 KIAA0907Q7Z7F0 614 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-219ENST00000620786 OR4N4Q8N0Y3 316 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 RAB39BQ96DA2 213 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 SYT3Q9BQG1 590 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 CXCL16Q9H2A7 254 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 EVA1AQ9H8M9 152 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 INMT-MINDY4F8WBC2 141 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 NME4O00746 187 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 PRKYO43930 277 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 TUBG1P23258 451 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 ADRA1AP35348 466 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF77Q15935 545 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 SPAG16Q8N0X2 631 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 ST6GALNAC5Q9BVH7 336 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 LIN28AQ9H9Z2 209 aaKnown RBP10.65□□□□□ -0.7
CLIP1-219ENST00000620786 C1GALT1Q9NS00 363 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 TMEM9Q9P0T7 183 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 PGAP2Q9UHJ9 254 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 HSPE1-MOB4S4R3N1 261 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 DCDC2BA2VCK2 349 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF749O43361 778 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 H2AFB2P0C5Z0 115 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 CHMP24386 653 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 GPR19Q15760 415 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 DPY19L4Q7Z388 723 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 PGBD5Q8N414 524 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 PIGCQ92535 297 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 WASH6PQ9NQA3 447 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 IL37Q9NZH6 218 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 TVP23AA6NH52 213 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 CENPBD1B2RD01 187 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 CD53P19397 219 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 MMP12P39900 470 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 IST1P53990 364 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 CFAP77Q6ZQR2 320 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 RTN4RL1Q86UN2 441 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-219ENST00000620786 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-219ENST00000620786 GLYATL2Q8WU03 294 aa10.65□□□□□ -0.7
CLIP1-219ENST00000620786 RGPD1P0DJD0 1748 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms