RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 ASZ1Q8WWH4 475 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 OR5P2Q8WZ92 322 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 TCEAL4Q96EI5 215 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 GPA33Q99795 319 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 TM6SF2Q9BZW4 377 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 ZCCHC4Q9H5U6 513 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 SLAMF7Q9NQ25 335 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 TAS2R5Q9NYW4 299 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF69Q9UC07 566 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 FCF1Q9Y324 198 aaKnown RBP10.09□□□□□ -0.79
UPF3A-212ENST00000619079 CCDC88CQ9P219 2028 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 GSAPA4D1B5 854 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 SURF4O15260 269 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 ARPC5O15511 151 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF749O43361 778 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 RAB3BP20337 219 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 PAICSP22234 425 aaKnown RBP10.09□□□□□ -0.79
UPF3A-212ENST00000619079 DLX5P56178 289 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 OR10A3P58181 314 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 LGALS3BPQ08380 585 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 MAPK14Q16539 360 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 HENMT1Q5T8I9 393 aaKnown RBP10.09□□□□□ -0.79
UPF3A-212ENST00000619079 TPGS2Q68CL5 300 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF626Q68DY1 528 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 SLC25A25Q6KCM7 469 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 HTR3DQ70Z44 454 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 GID4Q8IVV7 300 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 SLC44A3Q8N4M1 653 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 ASB12Q8WXK4 309 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 PLD4Q96BZ4 506 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 LYSMD1Q96S90 227 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 EFCAB11Q9BUY7 163 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 SLC6A20Q9NP91 592 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 KLHL1Q9NR64 748 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 INPP5EQ9NRR6 644 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 STOX2Q9P2F5 926 aaPredicted RBP10.09□□□□□ -0.79
UPF3A-212ENST00000619079 P2RX2Q9UBL9 471 aa10.09□□□□□ -0.79
UPF3A-212ENST00000619079 DVL2O14641 736 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 OR5F1O95221 314 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 CATP04040 527 aaKnown RBP10.08□□□□□ -0.8
UPF3A-212ENST00000619079 C8AP07357 584 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 ATP1B2P14415 290 aaPredicted RBP10.08□□□□□ -0.8
UPF3A-212ENST00000619079 TAF12Q16514 161 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 HFEQ30201 348 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 CEACAM19Q7Z692 300 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 PXKQ7Z7A4 578 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 BMPERQ8N8U9 685 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 OR1M1Q8NGA1 313 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 OR56A3Q8NH54 315 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 OR5W2Q8NH69 310 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 ASB13Q8WXK3 278 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 PNPLA2Q96AD5 504 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 FCRL4Q96PJ5 515 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 TREX2Q9BQ50 279 aaPredicted RBP10.08□□□□□ -0.8
UPF3A-212ENST00000619079 SEC22CQ9BRL7 303 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 UTP23Q9BRU9 249 aaKnown RBP10.08□□□□□ -0.8
UPF3A-212ENST00000619079 ALG8Q9BVK2 526 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 GSDMCQ9BYG8 508 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 SLC6A16Q9GZN6 736 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 OR10A4Q9H209 315 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 ANKRD19PQ9H560 264 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 HRASLSQ9HDD0 168 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 DMRT3Q9NQL9 472 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 CFAP97Q9P2B7 532 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 EPHA6Q9UF33 1036 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 UBE2QL1A1L167 161 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 ANKRD61A6NGH8 418 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 NEDD8-MDP1E9PL57 170 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 M0R3H8 397 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 ARPC1BO15143 372 aaKnown RBP10.08□□□□□ -0.8
UPF3A-212ENST00000619079 LINC01565O15544 149 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 PLPP2O43688 288 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 LRG1P02750 347 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 RPS26P62854 115 aaKnown RBP10.08□□□□□ -0.8
UPF3A-212ENST00000619079 PTSQ03393 145 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 FZD5Q13467 585 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 COL19A1Q14993 1142 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 SFRP4Q6FHJ7 346 aaPredicted RBP10.08□□□□□ -0.8
UPF3A-212ENST00000619079 OR5M10Q6IEU7 315 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 SLCO4C1Q6ZQN7 724 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 PGAP1Q75T13 922 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 TTC9BQ8N6N2 239 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 OR6K3Q8NGY3 331 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 C2orf15Q8WU43 125 aaKnown RBP10.08□□□□□ -0.8
UPF3A-212ENST00000619079 ECHDC3Q96DC8 303 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 EQTNQ9NQ60 294 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 CA10Q9NS85 328 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 CTSFQ9UBX1 484 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 RCE1Q9Y256 329 aa10.08□□□□□ -0.8
UPF3A-212ENST00000619079 TRAV1-2A0A0B4J238 106 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 J3QRE1 110 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 ABLIM3O94929 683 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 SNAPINO95295 136 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 MT-ND5P03915 603 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 GBAP04062 536 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 ASGR2P07307 311 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 IL3P08700 152 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 CSKP41240 450 aa10.07□□□□□ -0.8
UPF3A-212ENST00000619079 MECP2P51608 486 aaKnown RBP10.07□□□□□ -0.8
UPF3A-212ENST00000619079 SGSHP51688 502 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms