RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SERINC4A6NH21 518 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 SLC22A20A6NK97 555 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 EEF1E1-BLOC1S5C9J1V9 151 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 HMGN4O00479 90 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 EEF1E1O43324 174 aaKnown RBP14.4□□□□□ -0.1
BRCA1-228ENST00000618469 UGT2B17O75795 530 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 CD1EP15812 388 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 IGFBP2P18065 325 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 CTSSP25774 331 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 ASCL1P50553 236 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 P2RX1P51575 399 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 SUCLG1P53597 346 aaKnown RBP14.4□□□□□ -0.1
BRCA1-228ENST00000618469 CLDN15P56746 228 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 EEFSECP57772 596 aaKnown RBP14.4□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF141Q15928 474 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 GTDC1Q4AE62 458 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 COX20Q5RI15 118 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 TYW3Q6IPR3 259 aaKnown RBP14.4□□□□□ -0.1
BRCA1-228ENST00000618469 FRRS1Q6ZNA5 592 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 HMGN2P46Q86SG4 172 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 ACBD4Q8NC06 268 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 INTS12Q96CB8 462 aaKnown RBP14.4□□□□□ -0.1
BRCA1-228ENST00000618469 ITCHQ96J02 903 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 ZFP3Q96NJ6 502 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 UCN2Q96RP3 112 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 PINK1Q9BXM7 581 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 GSX1Q9H4S2 264 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF629Q9UEG4 869 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-228ENST00000618469 KCNE5Q9UJ90 142 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 ICAM5Q9UMF0 924 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 L3MBTL1Q9Y468 752 aa14.4□□□□□ -0.1
BRCA1-228ENST00000618469 PRAMEF27A3QJZ7 478 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 NR5A2O00482 541 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 EIF1AYO14602 144 aaKnown RBP14.39□□□□□ -0.11
BRCA1-228ENST00000618469 ZNF264O43296 627 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 CYP7B1O75881 506 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 H6PDO95479 791 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 KRT75O95678 551 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 TGM6O95932 706 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 LINGO3P0C6S8 592 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 UQCRC1P31930 480 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 OPRM1P35372 400 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 MRPL19P49406 292 aaKnown RBP14.39□□□□□ -0.11
BRCA1-228ENST00000618469 RPS3AP61247 264 aaKnown RBP14.39□□□□□ -0.11
BRCA1-228ENST00000618469 TXNL4AP83876 142 aaKnown RBP14.39□□□□□ -0.11
BRCA1-228ENST00000618469 FOXF2Q12947 444 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 PPP4R4Q6NUP7 873 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 POMZP3Q6PJE2 187 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 GGNQ86UU5 652 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 ZNF619Q8N2I2 560 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 METTL25Q8N6Q8 603 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 ANKFN1Q8N957 763 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 POC1BQ8TC44 478 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 ZFP90Q8TF47 636 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 ARSGQ96EG1 525 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 ZNF845Q96IR2 970 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-228ENST00000618469 SFXN3Q9BWM7 321 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 NPHS2Q9NP85 383 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 POLE3Q9NRF9 147 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 STOML1Q9UBI4 398 aa14.39□□□□□ -0.11
BRCA1-228ENST00000618469 ANKHD1Q8IWZ3 2542 aaKnown RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 ZNF469Q96JG9 3925 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 EIF4E2O60573 245 aaKnown RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 EDF1O60869 148 aaKnown RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 RCBTB2O95199 551 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 CSTAP01040 98 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 OPN1LWP04000 364 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 UBTFL6P0CB48 400 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 ME2P23368 584 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 PSMA4P25789 261 aaKnown RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 ELK4P28324 431 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 EIF1P41567 113 aaKnown RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 EIF1AXP47813 144 aaKnown RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 SKP2Q13309 424 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 CBFBQ13951 182 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 PON3Q15166 354 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 TOMM34Q15785 309 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 MAPK14Q16539 360 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 SYPL1Q16563 259 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 SLC2A7Q6PXP3 512 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 TMEM200AQ86VY9 491 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 TOR1AIP2Q8NFQ8 470 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 FNDC9Q8TBE3 224 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 FIG4Q92562 907 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 LRRC46Q96FV0 321 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 AURKBQ96GD4 344 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 TREX2Q9BQ50 279 aaPredicted RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 TMUB1Q9BVT8 246 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 QRSL1Q9H0R6 528 aaKnown RBP14.38□□□□□ -0.11
BRCA1-228ENST00000618469 CCDC167Q9P0B6 97 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 DCTN4Q9UJW0 460 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 ACANP16112 2415 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 MED12LQ86YW9 2145 aa14.38□□□□□ -0.11
BRCA1-228ENST00000618469 UQCRHLA0A096LP55 91 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 IL18BPO95998 194 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 CHRM4P08173 479 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 GUSBP08236 651 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 ZCCHC18P0CG32 403 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 IL11P20809 199 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 CRATP43155 626 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms