RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 LARP4Q71RC2 724 aaKnown RBP eCLIP5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 SDCCAG8Q86SQ7 713 aaPredicted RBP5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 LINC00523Q86TU6 105 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 GPR180Q86V85 440 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 UBE2J2Q8N2K1 259 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 RNF175Q8N4F7 328 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 OR4N2Q8NGD1 307 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 DUSP19Q8WTR2 217 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 GATAD1Q8WUU5 269 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 CKAP2Q8WWK9 683 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 ZNF75CPQ92670 426 aaPredicted RBP5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 RDH5Q92781 318 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 FBXL8Q96CD0 374 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 MFSD3Q96ES6 412 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 SLC47A1Q96FL8 570 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 MAP6Q96JE9 813 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 RNF145Q96MT1 663 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 GOLPH3Q9H4A6 298 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 ANKRA2Q9H9E1 313 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 FBXO6Q9NRD1 293 aaPredicted RBP5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 LYARQ9NX58 379 aaKnown RBP5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 SEC14L4Q9UDX3 406 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 BCAP29Q9UHQ4 241 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 AUP1Q9Y679 476 aa5.81□□□□□ -1.48
SCAMP1-206ENST00000618166 A0A1W2PR48 441 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 PGRMC2O15173 223 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 TO15178 435 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 RGS14O43566 566 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 TRIM13O60858 407 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 CBX7O95931 251 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 GAS8O95995 478 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 CDH2P19022 906 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 CD22P20273 847 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 NT5EP21589 574 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 COMTP21964 271 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 PSMA4P25789 261 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 EVI2BP34910 448 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 GDF5P43026 501 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 NPY2RP49146 381 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 HGFACQ04756 655 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 MGAT2Q10469 447 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 BIKQ13323 160 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 SP140Q13342 867 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 KHDRBS2Q5VWX1 349 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 MRNIPQ6NTE8 343 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 NPSR1Q6W5P4 371 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 C9orf139Q6ZV77 190 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 MARCH3Q86UD3 253 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 DENND6AQ8IWF6 608 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 ZNF100Q8IYN0 542 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 PARP8Q8N3A8 854 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 GLB1L3Q8NCI6 653 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 TTLQ8NG68 377 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 OR52R1Q8NGF1 315 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 UHMK1Q8TAS1 419 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 SLC35G2Q8TBE7 412 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 SLC9A6Q92581 669 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 KCNJ9Q92806 393 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 PEX13Q92968 403 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 REXO5Q96IC2 774 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 MUS81Q96NY9 551 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 MMP28Q9H239 520 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 PTGES2Q9H7Z7 377 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 BCO1Q9HAY6 547 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 SLC17A5Q9NRA2 495 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 LEF1Q9UJU2 399 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 ALMS1Q8TCU4 4167 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 CTAGE9A4FU28 777 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 TRAPPC2LH3BP13 241 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 LIASO43766 372 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 TMPRSS11DO60235 418 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 FADS1O60427 444 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 CDC14BO60729 498 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 SFTPBP07988 381 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 CELA3BP08861 270 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 HIST1H2AGP0C0S8 130 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 PABPC4LP0CB38 370 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 NHLRC4P0CG21 123 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 CTAGE8P0CG41 777 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 CPMP14384 443 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 NPR2P20594 1047 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 HIST1H2ADP20671 130 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 DRD5P21918 477 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 IL12BP29460 328 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 NTF4P34130 210 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 RPL4P36578 427 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 RFX3P48380 749 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 EMDP50402 254 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 SEC24CP53992 1094 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 MANFP55145 182 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 TMEM33P57088 247 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 TGM3Q08188 693 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 ZNF154Q13106 437 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 HNRNPA0Q13151 305 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 AP5B1Q2VPB7 878 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 GLYR1Q49A26 553 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 PCID2Q5JVF3 399 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 FBXW9Q5XUX1 488 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 NEPROQ6NW34 567 aa5.8□□□□□ -1.48
SCAMP1-206ENST00000618166 GALNT18Q6P9A2 607 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms