RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 EFNA1P20827 205 aaPredicted RBP17■□□□□ 0.31
CDX1-202ENST00000616154 RFX3P48380 749 aa17■□□□□ 0.31
CDX1-202ENST00000616154 KCNJ5P48544 419 aa17■□□□□ 0.31
CDX1-202ENST00000616154 PRKAG1P54619 331 aa17■□□□□ 0.31
CDX1-202ENST00000616154 AQP5P55064 265 aa17■□□□□ 0.31
CDX1-202ENST00000616154 GRAMD1BQ3KR37 738 aa17■□□□□ 0.31
CDX1-202ENST00000616154 SLC9B1Q4ZJI4 515 aa17■□□□□ 0.31
CDX1-202ENST00000616154 C20orf204Q6ZNR8 217 aa17■□□□□ 0.31
CDX1-202ENST00000616154 FAM214BQ7L5A3 538 aa17■□□□□ 0.31
CDX1-202ENST00000616154 ZNF550Q7Z398 422 aa17■□□□□ 0.31
CDX1-202ENST00000616154 CPLX4Q7Z7G2 160 aa17■□□□□ 0.31
CDX1-202ENST00000616154 GGNQ86UU5 652 aa17■□□□□ 0.31
CDX1-202ENST00000616154 ZNF610Q8N9Z0 462 aa17■□□□□ 0.31
CDX1-202ENST00000616154 OR8J2Q8NGG1 315 aa17■□□□□ 0.31
CDX1-202ENST00000616154 OR56A1Q8NGH5 318 aa17■□□□□ 0.31
CDX1-202ENST00000616154 C10orf82Q8WW14 230 aa17■□□□□ 0.31
CDX1-202ENST00000616154 SLC9A6Q92581 669 aa17■□□□□ 0.31
CDX1-202ENST00000616154 MOAP1Q96BY2 351 aa17■□□□□ 0.31
CDX1-202ENST00000616154 C16orf58Q96GQ5 468 aa17■□□□□ 0.31
CDX1-202ENST00000616154 COX4I2Q96KJ9 171 aa17■□□□□ 0.31
CDX1-202ENST00000616154 DUSP26Q9BV47 211 aa17■□□□□ 0.31
CDX1-202ENST00000616154 PIGUQ9H490 435 aa17■□□□□ 0.31
CDX1-202ENST00000616154 UBTD1Q9HAC8 227 aa17■□□□□ 0.31
CDX1-202ENST00000616154 GPATCH2Q9NW75 528 aa17■□□□□ 0.31
CDX1-202ENST00000616154 AQP8O94778 261 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 C6orf47O95873 294 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 ALOX5P09917 674 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 ZNF17P17021 662 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 TBXA2RP21731 343 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 LOXP28300 417 aaPredicted RBP16.99■□□□□ 0.31
CDX1-202ENST00000616154 CDC73Q6P1J9 531 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 PRSS57Q6UWY2 283 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 SPATA21Q7Z572 469 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 OR4C3Q8NH37 302 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 NUDT8Q8WV74 236 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 TESCQ96BS2 214 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 ARSGQ96EG1 525 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 HS3ST6Q96QI5 342 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 CCL19Q99731 98 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 EBF4Q9BQW3 602 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 CCDC28BQ9BUN5 200 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 BTBD2Q9BX70 525 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 WDR55Q9H6Y2 383 aaPredicted RBP16.99■□□□□ 0.31
CDX1-202ENST00000616154 DCTN4Q9UJW0 460 aa16.99■□□□□ 0.31
CDX1-202ENST00000616154 A0A1W2PQD3 144 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 RNASET2O00584 256 aaKnown RBP16.98■□□□□ 0.31
CDX1-202ENST00000616154 SCN2BO60939 215 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 OXSR1O95747 527 aaPredicted RBP16.98■□□□□ 0.31
CDX1-202ENST00000616154 KRT16P08779 473 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 EPHA3P29320 983 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 CCT3P49368 545 aaKnown RBP16.98■□□□□ 0.31
CDX1-202ENST00000616154 HBA1P69905 142 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 LASP1Q14847 261 aaKnown RBP16.98■□□□□ 0.31
CDX1-202ENST00000616154 SGCBQ16585 318 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 C22orf34Q6ZV56 151 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 ZAR1Q86SH2 424 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 ZC3HAV1LQ96H79 300 aaKnown RBP16.98■□□□□ 0.31
CDX1-202ENST00000616154 OR52B2Q96RD2 323 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 ELAC2Q9BQ52 826 aaKnown RBP16.98■□□□□ 0.31
CDX1-202ENST00000616154 ACTRT3Q9BYD9 372 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 STOML1Q9UBI4 398 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 JMJD1CQ15652 2540 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 ZANQ9Y493 2812 aa16.98■□□□□ 0.31
CDX1-202ENST00000616154 A0A087WZY1 265 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 SHISA8B8ZZ34 492 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 LBPP18428 481 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 SZRD1Q7Z422 152 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 MISPQ8IVT2 679 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 COX18Q8N8Q8 333 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 OR6K3Q8NGY3 331 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 FBXO30Q8TB52 745 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 THOC1Q96FV9 657 aaKnown RBP16.97■□□□□ 0.31
CDX1-202ENST00000616154 TMEM120AQ9BXJ8 343 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 KLHL4Q9C0H6 718 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 TCF7L2Q9NQB0 619 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 UBQLN4Q9NRR5 601 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 VDAC3Q9Y277 283 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 EMC9Q9Y3B6 208 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 DNHD1Q96M86 4753 aa16.97■□□□□ 0.31
CDX1-202ENST00000616154 A0A0G2JND7 137 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 H7C1Q1 480 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 EIF1AYO14602 144 aaKnown RBP16.96■□□□□ 0.31
CDX1-202ENST00000616154 GMFGO60234 142 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 PPP3CBP16298 524 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 EIF1AXP47813 144 aaKnown RBP16.96■□□□□ 0.31
CDX1-202ENST00000616154 SLC6A8P48029 635 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 POU6F2P78424 691 aaPredicted RBP16.96■□□□□ 0.31
CDX1-202ENST00000616154 DPY19L1Q2PZI1 675 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 BHLHB9Q6PI77 547 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 YTHDF3Q7Z739 585 aaKnown RBP16.96■□□□□ 0.31
CDX1-202ENST00000616154 GTPBP8Q8N3Z3 284 aaPredicted RBP16.96■□□□□ 0.31
CDX1-202ENST00000616154 GMPPAQ96IJ6 420 aaPredicted RBP16.96■□□□□ 0.31
CDX1-202ENST00000616154 ADGRG7Q96K78 797 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 PPP1R36Q96LQ0 422 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 Q96MF0 132 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 PRRG4Q9BZD6 226 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 FAM107BQ9H098 131 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 PLSCR4Q9NRQ2 329 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 FBXO34Q9NWN3 711 aa16.96■□□□□ 0.31
CDX1-202ENST00000616154 PAQR5Q9NXK6 330 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms