RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 RNF128Q8TEB7 428 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 TMEM174Q8WUU8 243 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 HMGB4Q8WW32 186 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 PTPN18Q99952 460 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 DPH2Q9BQC3 489 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-211ENST00000613795 ZNF251Q9BRH9 671 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 SLC25A31Q9H0C2 315 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 TMPRSS5Q9H3S3 457 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 IL21RQ9HBE5 538 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 CLDND1Q9NY35 253 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 VNN3Q9NY84 501 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 IGKV6-21A0A0C4DH24 114 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 HCRTR2O43614 444 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 RAD51DO75771 328 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 SCO1O75880 301 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 RHOP08100 348 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 MMP2P08253 660 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 CBR1P16152 277 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 APEX1P27695 318 aaKnown RBP6.48□□□□□ -1.37
CLCN3-211ENST00000613795 ARL3P36405 182 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 GDNFP39905 211 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 DHPSP49366 369 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-211ENST00000613795 ZNF84P51523 738 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 GP2P55259 537 aaKnown RBP6.48□□□□□ -1.37
CLCN3-211ENST00000613795 HENMT1Q5T8I9 393 aaKnown RBP6.48□□□□□ -1.37
CLCN3-211ENST00000613795 CBARPQ8N350 705 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-211ENST00000613795 ANKLE1Q8NAG6 615 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 ZNF689Q96CS4 500 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-211ENST00000613795 ZNF559Q9BR84 538 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 KLRF1Q9NZS2 232 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 NRXN3Q9Y4C0 1643 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 TMX2-CTNND1H3BSU7 103 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 LATO43561 262 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 SIX6O95475 246 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 SMIM6P0DI80 62 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 CPT2P23786 658 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 HTD2P86397 168 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 PLA2G7Q13093 441 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 OLIG2Q13516 323 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 FRMPD2BQ6IN97 320 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 C1orf87Q8N0U7 546 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 OR6S1Q8NH40 331 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 LHFPL5Q8TAF8 219 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 YIPF5Q969M3 257 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 SYT11Q9BT88 431 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 TOLLIPQ9H0E2 274 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 METTL7AQ9H8H3 244 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 BABAM2Q9NXR7 383 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 TRAPPC4Q9Y296 219 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 LSM5Q9Y4Y9 91 aaKnown RBP6.48□□□□□ -1.37
CLCN3-211ENST00000613795 V9GY05 133 aa6.48□□□□□ -1.37
CLCN3-211ENST00000613795 TRDV1A0A1B0GX56 115 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 C20orf202A1L168 122 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 MROH6A6NGR9 719 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 GJE1A6NN92 205 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 ZNF587BE7ETH6 402 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 K7EPK0 472 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 GPR39O43194 453 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 DUX1O43812 170 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 CLEC3AO75596 197 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 PTHP01270 115 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 HOXC13P31276 330 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 CTSOP43234 321 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-211ENST00000613795 NOVP48745 357 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 SELENOVP59797 346 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 OR4D1Q15615 310 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 POMZP3Q6PJE2 187 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 FAM111BQ6SJ93 734 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 Q6ZVU0 165 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 SSX7Q7RTT5 188 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 FAM71E2Q8N5Q1 922 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 OR4K1Q8NGD4 311 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 OR56B2PQ8NGI1 322 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 LMX1AQ8TE12 382 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 DAZLQ92904 295 aaKnown RBP6.47□□□□□ -1.37
CLCN3-211ENST00000613795 FOXJ1Q92949 421 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 SLC25A46Q96AG3 418 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 PTCHD1Q96NR3 888 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 MED18Q9BUE0 208 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 SYNPO2LQ9H987 977 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 PRTFDC1Q9NRG1 225 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 FBXL2Q9UKC9 423 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 PMS2P2O95744 297 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 EGFP01133 1207 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 PTAFRP25105 342 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 LIPAP38571 399 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 CSNK1DP48730 415 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 CCR9P51686 369 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 CDKN2DP55273 166 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 CYP27C1Q4G0S4 372 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 FAM209AQ5JX71 171 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 CDH26Q8IXH8 852 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 GPR150Q8NGU9 434 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 YIPF6Q96EC8 236 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 SCLYQ96I15 445 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 C16orf70Q9BSU1 422 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 ACTRT3Q9BYD9 372 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 RAB9BQ9NP90 201 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 SLC6A20Q9NP91 592 aa6.47□□□□□ -1.37
CLCN3-211ENST00000613795 GAR1Q9NY12 217 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms