RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 CPAMD8Q8IZJ3 1885 aa18.52■□□□□ 0.56
CPNE9-205ENST00000613455 TRAPPC13A5PLN9 417 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 GTPBP1O00178 669 aaKnown RBP18.52■□□□□ 0.55
CPNE9-205ENST00000613455 NKX2-8O15522 239 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 NTN1O95631 604 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 RYKP34925 604 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 PTGDSP41222 190 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 DAPP51397 102 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 ST3GAL3Q11203 375 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 DCST1Q5T197 706 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 ZNF468Q5VIY5 522 aaPredicted RBP18.52■□□□□ 0.55
CPNE9-205ENST00000613455 ZNF770Q6IQ21 691 aaPredicted RBP18.52■□□□□ 0.55
CPNE9-205ENST00000613455 FAHD1Q6P587 224 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 PODNL1Q6PEZ8 512 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 IL20RBQ6UXL0 311 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 LSRQ86X29 649 aaPredicted RBP18.52■□□□□ 0.55
CPNE9-205ENST00000613455 SH3YL1Q96HL8 342 aaPredicted RBP18.52■□□□□ 0.55
CPNE9-205ENST00000613455 ANKRD19PQ9H560 264 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 GALNT9Q9HCQ5 603 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 ATP13A2Q9NQ11 1180 aa18.52■□□□□ 0.55
CPNE9-205ENST00000613455 A0A0B4J2E0 115 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 A0A1B0GX12 115 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 SH3PXD2BA1X283 911 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 ARRDC5A6NEK1 342 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 FAAHO00519 579 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 CCNB2O95067 398 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 ENDOUP21128 410 aaKnown RBP18.51■□□□□ 0.55
CPNE9-205ENST00000613455 TRAM2Q15035 370 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 ACER2Q5QJU3 275 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 KDM4DQ6B0I6 523 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 ZNF613Q6PF04 617 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 TMCO5AQ8N6Q1 288 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 THAP4Q8WY91 577 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 SH2D2AQ9NP31 389 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 RYDENQ9NUL5 291 aaKnown RBP18.51■□□□□ 0.55
CPNE9-205ENST00000613455 SLC7A7Q9UM01 511 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 ICAM5Q9UMF0 924 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 C15orf41Q9Y2V0 281 aa18.51■□□□□ 0.55
CPNE9-205ENST00000613455 EML6Q6ZMW3 1958 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 PCNX3Q9H6A9 2034 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 A0A1B0GWA3 101 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 B4DXG7 233 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 HCRTR2O43614 444 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 EIF4E2O60573 245 aaKnown RBP18.5■□□□□ 0.55
CPNE9-205ENST00000613455 PRKAR1AP10644 381 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 THRBP10828 461 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 IFNA8P32881 189 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 CCR4P51679 360 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 LSM11P83369 360 aaKnown RBP eCLIP18.5■□□□□ 0.55
CPNE9-205ENST00000613455 MEP1AQ16819 746 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 WDR88Q6ZMY6 472 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 MISPQ8IVT2 679 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 NKAIN4Q8IVV8 208 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 DND1Q8IYX4 353 aaKnown RBP18.5■□□□□ 0.55
CPNE9-205ENST00000613455 TMEM156Q8N614 296 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 ZNF524Q96C55 264 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 FEVQ99581 238 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 PRSS27Q9BQR3 290 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 TRIM2Q9C040 744 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 TMEM27Q9HBJ8 222 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 SMPD3Q9NY59 655 aaPredicted RBP18.5■□□□□ 0.55
CPNE9-205ENST00000613455 TMCC3Q9ULS5 477 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 MSRB2Q9Y3D2 182 aa18.5■□□□□ 0.55
CPNE9-205ENST00000613455 TP53I11O14683 189 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 TLX3O43711 291 aaPredicted RBP18.49■□□□□ 0.55
CPNE9-205ENST00000613455 SNAP29O95721 258 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 ITGA3P26006 1051 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 CLK3P49761 638 aaKnown RBP18.49■□□□□ 0.55
CPNE9-205ENST00000613455 NHSL2Q5HYW2 709 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 BEST3Q8N1M1 668 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 ATG16L2Q8NAA4 619 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 CLEC1AQ8NC01 280 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 FGF11Q92914 225 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 LHPPQ9H008 270 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 METTL7AQ9H8H3 244 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 HPF1Q9NWY4 346 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 KLRF1Q9NZS2 232 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 HRH3Q9Y5N1 445 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 A0A087WUU8 490 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 ARGFXA6NJG6 315 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 LINGO3P0C6S8 592 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 CBLP22681 906 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 MST1P26927 711 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 CASP3P42574 277 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 TMEM81Q6P7N7 255 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 CADM2Q8N3J6 435 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 DUSP19Q8WTR2 217 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 SECISBP2Q96T21 854 aaKnown RBP18.49■□□□□ 0.55
CPNE9-205ENST00000613455 KIF17Q9P2E2 1029 aa18.49■□□□□ 0.55
CPNE9-205ENST00000613455 CEP295Q9C0D2 2601 aa18.48■□□□□ 0.55
CPNE9-205ENST00000613455 C2orf72A6NCS6 295 aa18.48■□□□□ 0.55
CPNE9-205ENST00000613455 CHP2O43745 196 aa18.48■□□□□ 0.55
CPNE9-205ENST00000613455 MITFO75030 526 aaPredicted RBP18.48■□□□□ 0.55
CPNE9-205ENST00000613455 IGFBP5P24593 272 aa18.48■□□□□ 0.55
CPNE9-205ENST00000613455 SLC6A8P48029 635 aa18.48■□□□□ 0.55
CPNE9-205ENST00000613455 HSPA13P48723 471 aa18.48■□□□□ 0.55
CPNE9-205ENST00000613455 CRTC2Q53ET0 693 aaPredicted RBP18.48■□□□□ 0.55
CPNE9-205ENST00000613455 APLFQ8IW19 511 aaPredicted RBP18.48■□□□□ 0.55
CPNE9-205ENST00000613455 AQP11Q8NBQ7 271 aa18.48■□□□□ 0.55
CPNE9-205ENST00000613455 TOR1AIP2Q8NFQ8 470 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms