RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CAMK2BQ13554 666 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 AGBL4Q5VU57 503 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 MBOAT2Q6ZWT7 520 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 ZAR1Q86SH2 424 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 FAM181AQ8N9Y4 354 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 SDR9C7Q8NEX9 313 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 PTP4A1Q93096 173 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 TOX2Q96NM4 488 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 BRD7Q9NPI1 651 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 TBC1D29Q9UFV1 150 aa13.06□□□□□ -0.32
COL6A1-207ENST00000612273 MRPS2Q9Y399 296 aaKnown RBP13.06□□□□□ -0.32
COL6A1-207ENST00000612273 UNC119BA6NIH7 251 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 HTR2AP28223 471 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 FXYD6P3P58550 94 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 DGCR2P98153 550 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 SF3A2Q15428 464 aaKnown RBP13.05□□□□□ -0.32
COL6A1-207ENST00000612273 TMEM52BQ4KMG9 183 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 MFSD12Q6NUT3 480 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 LINC00471Q8N535 108 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 COX18Q8N8Q8 333 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ZNF671Q8TAW3 534 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 MED18Q9BUE0 208 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 MAFFQ9ULX9 164 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 STON1Q9Y6Q2 735 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 CDHR4A6H8M9 788 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 OR5F1O95221 314 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ERGP11308 486 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 CLDN20P56880 219 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 LAMTOR1Q6IAA8 161 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 KIAA1211LQ6NV74 962 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 SFXN4Q6P4A7 337 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 LRRC25Q8N386 305 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-207ENST00000612273 LRRC17Q8N6Y2 441 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 GHSRQ92847 366 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 PEX11GQ96HA9 241 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 PDCD1LG2Q9BQ51 273 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ZNF649Q9BS31 505 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ADAM30Q9UKF2 790 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 CES1P1Q9UKY3 287 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ACSL5Q9ULC5 683 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-207ENST00000612273 PCDHGB7Q9Y5F8 929 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 COL4A3Q01955 1670 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 RFPL3O75679 317 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 CEACAM5P06731 702 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 STAT5AP42229 794 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 FGFBP1Q14512 234 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 OR1Q1Q15612 314 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 RPE65Q16518 533 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ODF4Q2M2E3 257 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 GAB4Q2WGN9 574 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ACSM3Q53FZ2 586 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ZNF542PQ5EBM4 170 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 FAM209AQ5JX71 171 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 CD200R1LQ6Q8B3 271 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 NRROSQ86YC3 692 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-207ENST00000612273 TMEM239Q8WW34 195 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 TRIM63Q969Q1 353 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ZNF681Q96N22 645 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 TNFRSF13CQ96RJ3 184 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 GDF15Q99988 308 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 CD93Q9NPY3 652 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 TRIM36Q9NQ86 728 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 ZNF346Q9UL40 294 aaKnown RBP13.05□□□□□ -0.32
COL6A1-207ENST00000612273 SLC27A6Q9Y2P4 619 aa13.05□□□□□ -0.32
COL6A1-207ENST00000612273 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 IRGMA1A4Y4 181 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 P2RX6O15547 441 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 TPD52L2O43399 206 aaKnown RBP13.04□□□□□ -0.32
COL6A1-207ENST00000612273 SOX30O94993 753 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 CPMP14384 443 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 CMPK1P30085 196 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 GABRA3P34903 492 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 HSD17B2P37059 387 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 ACTR1BP42025 376 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 ACTR1AP61163 376 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 PDGFRLQ15198 375 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 NDUFAF6Q330K2 333 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 TMEM35AQ53FP2 167 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 ENPP7Q6UWV6 458 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 VN1R4Q7Z5H5 301 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 FAM98AQ8NCA5 519 aaKnown RBP13.04□□□□□ -0.32
COL6A1-207ENST00000612273 BPIFA2Q96DR5 249 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 SDF2Q99470 211 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 TEAD3Q99594 435 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 ARHGDIGQ99819 225 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 SLC25A18Q9H1K4 315 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 KCNN2Q9H2S1 579 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 ADAM29Q9UKF5 820 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 FLVCR2Q9UPI3 526 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 TP53BP1Q12888 1972 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-207ENST00000612273 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 A0A1B0GVT2 93 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 TNFRSF10AO00220 468 aa13.04□□□□□ -0.32
COL6A1-207ENST00000612273 NOS1APO75052 506 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-207ENST00000612273 HMGN1P05114 100 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms