RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 NR0B2Q15466 257 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 DDI2Q5TDH0 399 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 CDC73Q6P1J9 531 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 SLC27A4Q6P1M0 643 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 FAM111BQ6SJ93 734 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 PAQR6Q6TCH4 344 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 MEX3DQ86XN8 651 aaKnown RBP12.88□□□□□ -0.35
COPS7B-223ENST00000611614 PHC2Q8IXK0 858 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 TCTE3Q8IZS6 198 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 OR4K14Q8NGD5 310 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 OR4C6Q8NH72 309 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 PIGXQ8TBF5 258 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 SAP25Q8TEE9 199 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 DMRTB1Q96MA1 342 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 RNF121Q9H920 327 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 ISYNA1Q9NPH2 558 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 FSCN3Q9NQT6 498 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
COPS7B-223ENST00000611614 PAQR5Q9NXK6 330 aaPredicted RBP12.88□□□□□ -0.35
COPS7B-223ENST00000611614 KLHL21Q9UJP4 597 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 GMEB2Q9UKD1 530 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 CLCA2Q9UQC9 943 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 SLC22A7Q9Y694 548 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 PI4KAP42356 2102 aa12.88□□□□□ -0.35
COPS7B-223ENST00000611614 BDP1A6H8Y1 2624 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 SNTNA6NMZ2 147 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 FCMRO60667 390 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 CDRT1O95170 752 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 GIMD1P0DJR0 217 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 CPEP16870 476 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 PRKCAP17252 672 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 AVPR1BP47901 424 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 SLC9A3P48764 834 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 SNRPNP63162 240 aaKnown RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 ZMAT1Q5H9K5 638 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 C3orf38Q5JPI3 329 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 RRM2BQ7LG56 351 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 BMP8AQ7Z5Y6 402 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 CARFQ8N187 725 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 ZBTB44Q8NCP5 570 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 TIGARQ9NQ88 270 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 PLCL2Q9UPR0 1127 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 DNAH14Q0VDD8 3507 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 CPED1A4D0V7 1026 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 FABP12A6NFH5 140 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 B4DXG7 233 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 HCN1O60741 890 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 ACP2P11117 423 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 AZGP1P25311 298 aaKnown RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.351e-12■■■■■ 29.2
COPS7B-223ENST00000611614 ERP29P30040 261 aaKnown RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 TRHRP34981 398 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 OMPP47874 163 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 RGS8P57771 180 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 RUNX2Q13950 521 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 LPAL2Q16609 132 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 DECR1Q16698 335 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 FRRS1Q6ZNA5 592 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 USP53Q70EK8 1073 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 SLC16A11Q8NCK7 471 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 OR8D4Q8NGM9 314 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 CDS1Q92903 461 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 COL26A1Q96A83 441 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 FAM46AQ96IP4 442 aaKnown RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 SLC38A2Q96QD8 506 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 MIXL1Q9H2W2 232 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 MTHFD2LQ9H903 347 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 CAPN10Q9HC96 672 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 ABCB9Q9NP78 766 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 FGF20Q9NP95 211 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 STARD5Q9NSY2 213 aa12.87□□□□□ -0.35
COPS7B-223ENST00000611614 TXNL4BQ9NX01 149 aaKnown RBP12.87□□□□□ -0.35
COPS7B-223ENST00000611614 PRODHO43272 600 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 CSF3P09919 207 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 ETV5P41161 510 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 ETV1P50549 477 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 GAS1P54826 345 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 RAB40BQ12829 278 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 TCTE1Q5JU00 501 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 SNAP47Q5SQN1 464 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 LCN1P1Q5VSP4 162 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 PLEKHM3Q6ZWE6 761 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
COPS7B-223ENST00000611614 TTYH2Q9BSA4 534 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 PRRG3Q9BZD7 231 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 C11orf54Q9H0W9 315 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-223ENST00000611614 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 PRDM9Q9NQV7 894 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 CNIH4Q9P003 139 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 DAPP1Q9UN19 280 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 ZNF443Q9Y2A4 671 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-223ENST00000611614 IGHV5-51A0A0C4DH38 117 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-223ENST00000611614 PATE3B3GLJ2 98 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 WWP2O00308 870 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 POLR1CO15160 346 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-223ENST00000611614 ARHGEF9O43307 516 aa12.86□□□□□ -0.35
COPS7B-223ENST00000611614 TMCC2O75069 709 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms