RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 HSD17B7P56937 341 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 BNC1Q01954 994 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 OXA1LQ15070 435 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CT45A2Q5DJT8 189 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 ALG10BQ5I7T1 473 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 GRAMD2AQ8IUY3 354 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 C1orf216Q8TAB5 229 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 SHDQ96IW2 340 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CHRDQ9H2X0 955 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 ABCB10Q9NRK6 738 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 TMEM5Q9Y2B1 443 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 RNF215Q9Y6U7 377 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 TRAV27A0A087WT01 109 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 ZNF670-ZNF695F2Z2N8 137 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 TBXA2RP21731 343 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 BCKDHBP21953 392 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 ALAS2P22557 587 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 HTR1FP30939 366 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 CD79BP40259 229 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 SLC1A3P43003 542 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 OR1D5P58170 312 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 GRM7Q14831 915 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 PLBD1Q6P4A8 553 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 TUBA3EQ6PEY2 450 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 OGFOD3Q6PK18 319 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 B3GLCTQ6Y288 498 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 TTLL10Q6ZVT0 673 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 TMPRSS11FQ6ZWK6 438 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 ZNF554Q86TJ5 538 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 CADM2Q8N3J6 435 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 OR51A7Q8NH64 312 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 G6PC3Q9BUM1 346 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 IFT27Q9BW83 186 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.57□□□□□ -0.4
NEK3-205ENST00000610828 SNTG1Q9NSN8 517 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 TOR4AQ9NXH8 423 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 QPCTLQ9NXS2 382 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 EPHA6Q9UF33 1036 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 H0YIG0 161 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 BHLHE40O14503 412 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 PIAS2O75928 621 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 RCBTB2O95199 551 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 ACAA2P42765 397 aaKnown RBP12.57□□□□□ -0.4
NEK3-205ENST00000610828 FUT7Q11130 342 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 DNASE1L3Q13609 305 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 DSG2Q14126 1118 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 TBC1D25Q3MII6 688 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 SNAP47Q5SQN1 464 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 THSD4Q6ZMP0 1018 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 GATAD2AQ86YP4 633 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 PARP16Q8N5Y8 322 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 SECISBP2Q96T21 854 aaKnown RBP12.57□□□□□ -0.4
NEK3-205ENST00000610828 TPK1Q9H3S4 243 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 MED20Q9H944 212 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
NEK3-205ENST00000610828 WNT16Q9UBV4 365 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 SIGLEC7Q9Y286 467 aa12.57□□□□□ -0.4
NEK3-205ENST00000610828 YARS2Q9Y2Z4 477 aaKnown RBP12.57□□□□□ -0.4
NEK3-205ENST00000610828 CEP192Q8TEP8 1941 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 FUOMA2VDF0 154 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 FITM1A5D6W6 292 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 CTDSP2O14595 271 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 PLD2O14939 933 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 LRRTM2O43300 516 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 TBX1O43435 398 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 PRKNO60260 465 aaPredicted RBP12.56□□□□□ -0.4
NEK3-205ENST00000610828 OR2B3O76000 313 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 ARL4DP49703 201 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 ZNF45Q02386 682 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 MXD1Q05195 221 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 DBPQ10586 325 aaPredicted RBP12.56□□□□□ -0.4
NEK3-205ENST00000610828 FGFBP1Q14512 234 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 RPL13AP3Q6NVV1 102 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 SPEM1Q8N4L4 309 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 BCORP1Q8N888 145 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 OR51G2Q8NGK0 314 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 UFD1Q92890 307 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 CLIP3Q96DZ5 547 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 C1GALT1C1Q96EU7 318 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 ZNF578Q96N58 590 aaPredicted RBP12.56□□□□□ -0.4
NEK3-205ENST00000610828 ARHGAP9Q9BRR9 750 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 TRIM2Q9C040 744 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 EVA1AQ9H8M9 152 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 POLE4Q9NR33 117 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 C17orf105B2RV13 164 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 TMEM150CB9EJG8 249 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 GNB5O14775 395 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 UPK1BO75841 260 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 NGFRP08138 427 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 GUSBP08236 651 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 PAICSP22234 425 aaKnown RBP12.56□□□□□ -0.4
NEK3-205ENST00000610828 OR1D4P47884 311 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 ATP12AP54707 1039 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 EPHA4P54764 986 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 CTBP2P56545 445 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 RPS25P62851 125 aaKnown RBP12.56□□□□□ -0.4
NEK3-205ENST00000610828 SERTAD2Q14140 314 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 ZNF141Q15928 474 aa12.56□□□□□ -0.4
NEK3-205ENST00000610828 NDUFAF6Q330K2 333 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms