RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 GAS6Q14393 721 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 DCST2Q5T1A1 773 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 PYHIN1Q6K0P9 492 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 LYPD4Q6UWN0 246 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 PRSS45Q7RTY3 260 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 NLRP8Q86W28 1048 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 MS4A15Q8N5U1 240 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 TMEM99Q8N816 258 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 PFN4Q8NHR9 129 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 COQ8AQ8NI60 647 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 NSMAFQ92636 917 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 PEX11GQ96HA9 241 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 DGAT2Q96PD7 388 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 TNFRSF13CQ96RJ3 184 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF559Q9BR84 538 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 OR8D2Q9GZM6 311 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 RANBP3Q9H6Z4 567 aaPredicted RBP6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 SYNPO2LQ9H987 977 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 ISG20L2Q9H9L3 353 aaKnown RBP6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 WDR90Q96KV7 1748 aa6.4□□□□□ -1.38
SYNPO2-206ENST00000610556 ACOD1A6NK06 481 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SGK494L7N484 410 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 KLHL18O94889 574 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 TIMP1P01033 207 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 TFPIP10646 304 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 PSMA3P25788 255 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 CD79BP40259 229 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 ETV6P41212 452 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 HMGA2P52926 109 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 MVDP53602 400 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 PDE7AQ13946 482 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 RPE65Q16518 533 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 LRRC37A5PQ49AS3 106 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 TRMT12Q53H54 448 aaKnown RBP6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC48A1Q6P1K1 146 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF322Q6U7Q0 402 aaPredicted RBP6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 LRRC28Q86X40 367 aaPredicted RBP6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 REM2Q8IYK8 340 aaPredicted RBP6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 GPR135Q8IZ08 494 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 FBXL6Q8N531 539 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 DEFB119Q8N690 84 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 OR13C5Q8NGS8 318 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 HCAR2Q8TDS4 363 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 THAP4Q8WY91 577 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 MS4A6EQ96DS6 147 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 CCDC120Q96HB5 630 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 MSLNLQ96KJ4 702 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 CNN2Q99439 309 aaKnown RBP6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 APOOQ9BUR5 198 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 TRIM2Q9C040 744 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 CENPMQ9NSP4 180 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 PFDN2Q9UHV9 154 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 GPR55Q9Y2T6 319 aaPredicted RBP6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 CHST2Q9Y4C5 530 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SIP14410 1827 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 TMEM129A0AVI4 362 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 CDHR4A6H8M9 788 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 RFXAPO00287 272 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 PEX12O00623 359 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 RDH16O75452 317 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 KLF8O95600 359 aaPredicted RBP6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 ADH1BP00325 375 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 C5AR1P21730 350 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 GNALP38405 381 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 FNTBP49356 437 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 CRYBA2P53672 197 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 ERVK-25P63136 954 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 TEKQ02763 1124 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 ERV3-1Q14264 604 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 DUSP5Q16690 384 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SCGB2B2Q4G0G5 96 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 ARTNQ5T4W7 220 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SFXN4Q6P4A7 337 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 MBOAT2Q6ZWT7 520 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 PLPP6Q8IY26 295 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 ARL14Q8N4G2 192 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF248Q8NDW4 579 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SIMC1Q8NDZ2 872 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 OR5M3Q8NGP4 307 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 FCAMRQ8WWV6 532 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SGTBQ96EQ0 304 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC35A4Q96G79 324 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 FOXN4Q96NZ1 517 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 WFDC6Q9BQY6 131 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 GON7Q9BXV9 100 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 B3GNT4Q9C0J1 378 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 NPAP1Q9NZP6 1156 aa6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 MYEF2Q9P2K5 600 aaKnown RBP6.4□□□□□ -1.39
SYNPO2-206ENST00000610556 SPTBP11277 2137 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 PLXNA1Q9UIW2 1896 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MEIS3P1A6NDR6 274 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TVP23AA6NH52 213 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TEX46H3BTG2 121 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MAN2B1O00754 1011 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 GREM1O60565 184 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 RFPL3O75679 317 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 GATBO75879 557 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CRYZL1O95825 349 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TACSTD2P09758 323 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms