RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 RASGEF1BQ0VAM2 473 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 LCP2Q13094 533 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 TRADDQ15628 312 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 PRSS53Q2L4Q9 553 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 ARL13AQ5H913 290 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 IL17RELQ6ZVW7 336 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 ZNF551Q7Z340 670 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 UBE2J2Q8N2K1 259 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 ZNF527Q8NB42 609 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 FBXO27Q8NI29 283 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 FAM76AQ8TAV0 307 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 ZFP90Q8TF47 636 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 PAFAH2Q99487 392 aa15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 GPC6Q9Y625 555 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-211ENST00000609024 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.33■□□□□ 0.053e-9■□□□□ 9.7
CHMP4A-211ENST00000609024 A0A1W2PQD3 144 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 CCT8L1PA6NM43 557 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 TRIM49D1C9J1S8 452 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 E7EQL1 145 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 POC1B-GALNT4F8VUJ3 575 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 GTPBP1O00178 669 aaKnown RBP15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 RGS14O43566 566 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 KIAA0513O60268 411 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 IMPDH1P20839 514 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 ENPP1P22413 925 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 ZNF83P51522 516 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 EFNA4P52798 201 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 CHRNEQ04844 493 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 RUNX1T1Q06455 604 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 GGTLC2Q14390 218 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 FAM120AOSQ5T036 256 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 SEZ6L2Q6UXD5 910 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 MTERF4Q7Z6M4 381 aaKnown RBP15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 SLC22A9Q8IVM8 553 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 FAM110BQ8TC76 370 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 C10orf105Q8TEF2 133 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 MS4A4EQ96PG1 132 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 TMEM237Q96Q45 408 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 KCNA7Q96RP8 456 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 BCO1Q9HAY6 547 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 MID1IP1Q9NPA3 183 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 ANK2Q01484 3957 aa15.33■□□□□ 0.04
CHMP4A-211ENST00000609024 CADP27708 2225 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 ESYT3A0FGR9 886 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 OR5H1A6NKK0 313 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 C9JVG2 144 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 H7C417 338 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 RAD51DO75771 328 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 ATP5F1P24539 256 aaPredicted RBP15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 IGFBP5P24593 272 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 RAC3P60763 192 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 C11orf71Q6IPW1 123 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 ZNF544Q6NX49 715 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 GALNT5Q7Z7M9 940 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 OR52N5Q8NH56 324 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 C3orf49Q96BT1 292 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 ZNF775Q96BV0 537 aaPredicted RBP15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 PSD2Q9BQI7 771 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 PIMREGQ9BSJ6 248 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 RRAGDQ9NQL2 400 aaPredicted RBP15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 NINJ2Q9NZG7 142 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 NPAP1Q9NZP6 1156 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 FKBP7Q9Y680 259 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 ATP23Q9Y6H3 246 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 ALPK2Q86TB3 2170 aa15.32■□□□□ 0.04
CHMP4A-211ENST00000609024 SERTM1A2A2V5 107 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 M0R1B8 84 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 PGRP06401 933 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 GSTA1P08263 222 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 SBK3P0C264 359 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 IGHV1-2P23083 117 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 PDLIM4P50479 330 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 P2RX1P51575 399 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 POU6F2P78424 691 aaPredicted RBP15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 ZNF117Q03924 483 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 SELENBP1Q13228 472 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 CD226Q15762 336 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 IQCCQ4KMZ1 466 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 CCNJQ5T5M9 372 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 NOXRED1Q6NXP6 359 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 ZCCHC12Q6PEW1 402 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 TMCO5AQ8N6Q1 288 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 SLC16A11Q8NCK7 471 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 INPP5KQ9BT40 448 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 TRMOQ9BU70 441 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 HOXD1Q9GZZ0 328 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 CXorf36Q9H7Y0 433 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 FKRPQ9H9S5 495 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 EMC3Q9P0I2 261 aa15.31■□□□□ 0.04
CHMP4A-211ENST00000609024 A0A1W2PNR3 127 aa15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 SEC22BO75396 215 aa15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 RSL1D1O76021 490 aaKnown RBP15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 SNRPAP09012 282 aaKnown RBP15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 ACP2P11117 423 aa15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 APEHP13798 732 aaKnown RBP15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 CD40P25942 277 aa15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 SUMO3P55854 103 aaPredicted RBP15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 CARTPTQ16568 116 aa15.3■□□□□ 0.04
CHMP4A-211ENST00000609024 DUSP5Q16690 384 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms