RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 FNDC7Q5VTL7 733 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 PLAG1Q6DJT9 500 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 C1orf94Q6P1W5 598 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 PGBD2Q6P3X8 592 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 CD300LDQ6UXZ3 194 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 ZNF730Q6ZMV8 503 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 NUP54Q7Z3B4 507 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 THAP5Q7Z6K1 395 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 TSPYL5Q86VY4 417 aaPredicted RBP12.59□□□□□ -0.39
IRF3-229ENST00000601373 PRR22Q8IZ63 422 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 LSMEM1Q8N8F7 131 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 FAM71CQ8NEG0 241 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 OR4K5Q8NGD3 323 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 SLC22A8Q8TCC7 542 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 GNPDA2Q8TDQ7 276 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 HS6ST2Q96MM7 605 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 MUS81Q96NY9 551 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 APOL4Q9BPW4 351 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 PRR14Q9BWN1 585 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 UCK2Q9BZX2 261 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 LAT2Q9GZY6 243 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 POLR1BQ9H9Y6 1135 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 MMP25Q9NPA2 562 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 CTPS2Q9NRF8 586 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 FOXJ2Q9P0K8 574 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 PCDHGA6Q9Y5G7 932 aa12.59□□□□□ -0.39
IRF3-229ENST00000601373 A0A087WUU8 490 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 NSG1A0A0A6YYJ2 146 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 ALG1L2C9J202 215 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 SOCS6O14544 535 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 BCKDKO14874 412 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 ZNF264O43296 627 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.4
IRF3-229ENST00000601373 RAD1O60671 282 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 GNAO1P09471 354 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 UBL4AP11441 157 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 ICAM2P13598 275 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 FUT4P22083 530 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 HTR2AP28223 471 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 RYKP34925 604 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 SLC6A8P48029 635 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 COPZ1P61923 177 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 PLAURQ03405 335 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 FOXD4Q12950 439 aaPredicted RBP12.58□□□□□ -0.4
IRF3-229ENST00000601373 DNASE1L3Q13609 305 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 ZNF691Q5VV52 312 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 KIRREL2Q6UWL6 708 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 MISPQ8IVT2 679 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 GALNT15Q8N3T1 639 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 OR11G2Q8NGC1 345 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 PIGXQ8TBF5 258 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 PHOSPHO1Q8TCT1 267 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 TTC9Q92623 222 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 GTPBP3Q969Y2 492 aaKnown RBP12.58□□□□□ -0.4
IRF3-229ENST00000601373 TMCO6Q96DC7 493 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 MPP4Q96JB8 637 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 CCNL2Q96S94 520 aaPredicted RBP12.58□□□□□ -0.4
IRF3-229ENST00000601373 PITX2Q99697 317 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 NIPSNAP1Q9BPW8 284 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 MESP1Q9BRJ9 268 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 SELENONQ9NZV5 590 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 MYOTQ9UBF9 498 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 RPS6KB2Q9UBS0 482 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 SCOCQ9UIL1 159 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 KLK13Q9UKR3 277 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 NDRG4Q9ULP0 352 aaKnown RBP12.58□□□□□ -0.4
IRF3-229ENST00000601373 SLC7A7Q9UM01 511 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 GMPPBQ9Y5P6 360 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 LAMA5O15230 3695 aa12.58□□□□□ -0.4
IRF3-229ENST00000601373 TMEM200CA6NKL6 621 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 E9PQ18 207 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 STMND1H3BQB6 276 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 CHP2O43745 196 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 ICOSLGO75144 302 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 BCAS1O75363 584 aaPredicted RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 OSMP13725 252 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 POU2F1P14859 743 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 RBMS1P29558 406 aaKnown RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 POLR2IP36954 125 aaKnown RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 STAT5AP42229 794 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 RPP38P78345 283 aaKnown RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 ALDH6A1Q02252 535 aaKnown RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 ULK3Q6PHR2 472 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 TTC33Q6PID6 262 aaPredicted RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 MBOAT2Q6ZWT7 520 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 PPP1R32Q7Z5V6 425 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 ZER1Q7Z7L7 766 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 POGLUT1Q8NBL1 392 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 DNAJA4Q8WW22 397 aaPredicted RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 HRASLS5Q96KN8 279 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 TBL1XR1Q9BZK7 514 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 ING2Q9H160 280 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 ZNF696Q9H7X3 374 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 LIN28AQ9H9Z2 209 aaKnown RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 ZBTB20Q9HC78 741 aaPredicted RBP12.57□□□□□ -0.4
IRF3-229ENST00000601373 HHATLQ9HCP6 504 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 MYRFQ9Y2G1 1151 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 NTNG1Q9Y2I2 539 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 AKAP13Q12802 2813 aa12.57□□□□□ -0.4
IRF3-229ENST00000601373 A0A0B4J2E0 115 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms