RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	DUSP7	Q16829	419 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	MRPL2	Q5T653	305 aa	Known RBP	20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	FNDC7	Q5VTL7	733 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	APOOL	Q6UXV4	268 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	PACS2	Q86VP3	889 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	GATS	Q8NAP1	163 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	PYURF	Q96I23	114 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	HSH2D	Q96JZ2	352 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	RTN4R	Q9BZR6	473 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZFP64	Q9NPA5	681 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026		V9GYQ6	96 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	SHANK1	Q9Y566	2161 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	C17orf51	A8MQB3	221 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	FAM166B	A8MTA8	275 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	ACOT7	O00154	380 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	GNB5	O14775	395 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	RNF144A	P50876	292 aa	Predicted RBP	20	■□□□□ 0.79
LTBP4-227	ENST00000600026	ACTR3	P61158	418 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	ALDH6A1	Q02252	535 aa	Known RBP	20	■□□□□ 0.79
LTBP4-227	ENST00000600026	C17orf67	Q0P5P2	114 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	IFI44L	Q53G44	452 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	ENPP6	Q6UWR7	440 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	GRAMD2A	Q8IUY3	354 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZNF440	Q8IYI8	595 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	GPR32P1	Q8NGA4	272 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	FAR1	Q8WVX9	515 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	NR4A3	Q92570	626 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	DENND2D	Q9H6A0	471 aa	Predicted RBP	20	■□□□□ 0.79
LTBP4-227	ENST00000600026	SLC9A8	Q9Y2E8	581 aa		20	■□□□□ 0.79
LTBP4-227	ENST00000600026	TCRBV3S1	A0A5B6	114 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	CDHR4	A6H8M9	788 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	CLDN24	A6NM45	220 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZNF264	O43296	627 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	EIF4E2	O60573	245 aa	Known RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	LGI1	O95970	557 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	GPI	P06744	558 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	HOXB6	P17509	224 aa	Known RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	PSMA4	P25789	261 aa	Known RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	MST1	P26927	711 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	CHRNB3	Q05901	458 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	CCNI	Q14094	377 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	CD226	Q15762	336 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	HYAL4	Q2M3T9	481 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	FAM98B	Q52LJ0	330 aa	Known RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZNF324B	Q6AW86	544 aa	Predicted RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	VTCN1	Q7Z7D3	282 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	SIAH3	Q8IW03	269 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	CLIP4	Q8N3C7	705 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	TMEM251	Q8N6I4	163 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	OR10Q1	Q8NGQ4	319 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	OR1J4	Q8NGS1	313 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	GEMIN6	Q8WXD5	167 aa	Known RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	SLC35B4	Q969S0	331 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	SLC47A1	Q96FL8	570 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	BARD1	Q99728	777 aa	Known RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZNF703	Q9H7S9	590 aa	Predicted RBP	19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	AGPAT4	Q9NRZ5	378 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	PPP4R1L	Q9P1A2	415 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	SH3GLB1	Q9Y371	365 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	KALRN	O60229	2985 aa		19.99	■□□□□ 0.79
LTBP4-227	ENST00000600026	MAST4	O15021	2626 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	TENM4	Q6N022	2769 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	DHRS12	A0PJE2	317 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	TFEC	O14948	347 aa	Predicted RBP	19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	CYP7B1	O75881	506 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	RFPL3S	P0C7P2	107 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	UBTFL6	P0CB48	400 aa	Predicted RBP	19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	ELAVL4	P26378	380 aa	Known RBP	19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	ERF	P50548	548 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	PPIA	P62937	165 aa	Known RBP	19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	TLE1	Q04724	770 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	GLIPR1L2	Q4G1C9	344 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	TIGD3	Q6B0B8	471 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZNF550	Q7Z398	422 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	ZNF605	Q86T29	641 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	SLC22A16	Q86VW1	577 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	TMCO5A	Q8N6Q1	288 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	WDSUB1	Q8N9V3	476 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	DUSP19	Q8WTR2	217 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	CNOT9	Q92600	299 aa	Known RBP	19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	SEPHS2	Q99611	448 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	ARHGDIG	Q99819	225 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	SLX1A	Q9BQ83	275 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	LAT2	Q9GZY6	243 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	MAGIX	Q9H6Y5	334 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	RLIM	Q9NVW2	624 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	DNAJB12	Q9NXW2	375 aa	Known RBP	19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	B4GALT7	Q9UBV7	327 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	CARD8	Q9Y2G2	431 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	C15orf41	Q9Y2V0	281 aa		19.98	■□□□□ 0.79
LTBP4-227	ENST00000600026	TMEM229A	B2RXF0	380 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026		B4DXG7	233 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026		H0YHG0	523 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	HCRTR2	O43614	444 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	MAGEA5	P43359	124 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	TDGF1P3	P51864	188 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	RGS8	P57771	180 aa	Predicted RBP	19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	KCNC4	Q03721	635 aa		19.97	■□□□□ 0.79
LTBP4-227	ENST00000600026	NRF1	Q16656	503 aa		19.97	■□□□□ 0.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms