RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ME2P23368 584 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 EIF1P41567 113 aaKnown RBP25.41■■□□□ 1.66
SSBP4-206ENST00000599699 DSTNP60981 165 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 RPS3AP61247 264 aaKnown RBP25.41■■□□□ 1.66
SSBP4-206ENST00000599699 SF3A3Q12874 501 aaKnown RBP eCLIP25.41■■□□□ 1.667e-12■■■■□ 19.8
SSBP4-206ENST00000599699 FOXF1Q12946 379 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 CBFBQ13951 182 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 LRRC74BQ6ZQY2 392 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 GPR119Q8TDV5 335 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 OIT3Q8WWZ8 545 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 ZG16BQ96DA0 208 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 UCN2Q96RP3 112 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 TMEM120AQ9BXJ8 343 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 PINK1Q9BXM7 581 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 LAT2Q9GZY6 243 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 QRSL1Q9H0R6 528 aaKnown RBP25.41■■□□□ 1.66
SSBP4-206ENST00000599699 TMEM185BQ9H7F4 350 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 ARHGAP21Q5T5U3 1957 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 CRYBG3Q68DQ2 2970 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 EIF1AYO14602 144 aaKnown RBP25.4■■□□□ 1.66
SSBP4-206ENST00000599699 OPN1LWP04000 364 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 CTSSP25774 331 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 AGFG1P52594 562 aaKnown RBP25.4■■□□□ 1.66
SSBP4-206ENST00000599699 ZNF136P52737 540 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 MVDP53602 400 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 CLDN15P56746 228 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 FGFBP1Q14512 234 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 SGCBQ16585 318 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 POC1BQ8TC44 478 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 THUMPD3Q9BV44 507 aaKnown RBP25.4■■□□□ 1.66
SSBP4-206ENST00000599699 SLC38A1Q9H2H9 487 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 RAD21L1Q9H4I0 556 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 ST6GALNAC1Q9NSC7 600 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-206ENST00000599699 ZNF629Q9UEG4 869 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-206ENST00000599699 SLC35A3Q9Y2D2 325 aa25.4■■□□□ 1.66
SSBP4-206ENST00000599699 TMEM247A6NEH6 219 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 SLC22A20A6NK97 555 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 CLIC1O00299 241 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 RAC1P63000 192 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 TFF3Q07654 80 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 SKP2Q13309 424 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 TOMM34Q15785 309 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-206ENST00000599699 PAGE3Q5JUK9 113 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 PPP4R4Q6NUP7 873 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 MEX3BQ6ZN04 569 aaKnown RBP25.39■■□□□ 1.66
SSBP4-206ENST00000599699 FBXO27Q8NI29 283 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 INTS12Q96CB8 462 aaKnown RBP25.39■■□□□ 1.66
SSBP4-206ENST00000599699 ZFP3Q96NJ6 502 aa25.39■■□□□ 1.66
SSBP4-206ENST00000599699 MTHFD2LQ9H903 347 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-206ENST00000599699 GPC6Q9Y625 555 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-206ENST00000599699 NBPF19A0A087WUL8 3843 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 RCBTB2O95199 551 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 TGM6O95932 706 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 PSMA4P25789 261 aaKnown RBP25.38■■□□□ 1.65
SSBP4-206ENST00000599699 OPRM1P35372 400 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 EIF1AXP47813 144 aaKnown RBP25.38■■□□□ 1.65
SSBP4-206ENST00000599699 ARFIP2P53365 341 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 QPRTQ15274 297 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 METTL21CQ5VZV1 264 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 AP1ARQ63HQ0 302 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 GGNQ86UU5 652 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 GCNT2Q8N0V5 402 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 ARSGQ96EG1 525 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 SLC52A3Q9NQ40 469 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 NPDC1Q9NQX5 325 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-206ENST00000599699 THUMPD1Q9NXG2 353 aaKnown RBP25.38■■□□□ 1.65
SSBP4-206ENST00000599699 CALML5Q9NZT1 146 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 SLAMF8Q9P0V8 285 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 CELSR2Q9HCU4 2923 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 KIAA1549Q9HCM3 1950 aa25.38■■□□□ 1.65
SSBP4-206ENST00000599699 A0A1W2PP18 115 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 BCHEP06276 602 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 CD1EP15812 388 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 PRKCAP17252 672 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 KCNJ10P78508 379 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 GNA13Q14344 377 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 RGNQ15493 299 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 LRIF1Q5T3J3 769 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 LILRA2Q8N149 483 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 METTL25Q8N6Q8 603 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 RELL2Q8NC24 303 aaPredicted RBP25.37■■□□□ 1.65
SSBP4-206ENST00000599699 FIG4Q92562 907 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 ZNF845Q96IR2 970 aaPredicted RBP25.37■■□□□ 1.65
SSBP4-206ENST00000599699 ZNF385DQ9H6B1 395 aa25.37■■□□□ 1.65
SSBP4-206ENST00000599699 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.37■■□□□ 1.65
SSBP4-206ENST00000599699 AGAP5A6NIR3 686 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 CLDN24A6NM45 220 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 IL7RP16871 459 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 PGCP20142 388 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 IL11P20809 199 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 ADH6P28332 368 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 PGM1P36871 562 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 MDH1P40925 334 aaKnown RBP25.36■■□□□ 1.65
SSBP4-206ENST00000599699 CRISP3P54108 245 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 FOXF2Q12947 444 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 PON3Q15166 354 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 PEX5LQ8IYB4 626 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 ATP6V1C2Q8NEY4 427 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 SLC38A5Q8WUX1 472 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 WDR60Q8WVS4 1066 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms