RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 EDF1O60869 148 aaKnown RBP16.8■□□□□ 0.28
PNKP-213ENST00000599543 CRYGSP22914 178 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 PHC1P78364 1004 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 MLC1Q15049 377 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 EXOC3L2Q2M3D2 409 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 SPANXN4Q5MJ08 99 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 CCNJQ5T5M9 372 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 ZNF550Q7Z398 422 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 ZAR1Q86SH2 424 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 ARFGAP2Q8N6H7 521 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 ZNF610Q8N9Z0 462 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 OR10D3Q8NH80 312 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 FAM110BQ8TC76 370 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 ACTRT2Q8TDY3 377 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 FAM120BQ96EK7 910 aaKnown RBP16.8■□□□□ 0.28
PNKP-213ENST00000599543 C16orf58Q96GQ5 468 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 ZC3HAV1LQ96H79 300 aaKnown RBP16.8■□□□□ 0.28
PNKP-213ENST00000599543 SH3YL1Q96HL8 342 aaPredicted RBP16.8■□□□□ 0.28
PNKP-213ENST00000599543 RNF145Q96MT1 663 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 KLHL4Q9C0H6 718 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 GSX1Q9H4S2 264 aaPredicted RBP16.8■□□□□ 0.28
PNKP-213ENST00000599543 CXorf36Q9H7Y0 433 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 SIRT3Q9NTG7 399 aaPredicted RBP16.8■□□□□ 0.28
PNKP-213ENST00000599543 MED17Q9NVC6 651 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 NSD1Q96L73 2696 aaPredicted RBP16.8■□□□□ 0.28
PNKP-213ENST00000599543 C7orf72A4D263 438 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 SIAH2O43255 324 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 SYNGR4O95473 234 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 HMGN2P05204 90 aaKnown RBP16.79■□□□□ 0.28
PNKP-213ENST00000599543 SOAT1P35610 550 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 SLC6A8P48029 635 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 CTBP2P56545 445 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 POU6F2P78424 691 aaPredicted RBP16.79■□□□□ 0.28
PNKP-213ENST00000599543 NKX6-1P78426 367 aaPredicted RBP16.79■□□□□ 0.28
PNKP-213ENST00000599543 LASP1Q14847 261 aaKnown RBP16.79■□□□□ 0.28
PNKP-213ENST00000599543 PLPPR5Q32ZL2 321 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 OR6K3Q8NGY3 331 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 OR5AK3PQ8NH89 298 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 GMPPAQ96IJ6 420 aaPredicted RBP16.79■□□□□ 0.28
PNKP-213ENST00000599543 STACQ99469 402 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 PRPF18Q99633 342 aaKnown RBP16.79■□□□□ 0.28
PNKP-213ENST00000599543 BTBD2Q9BX70 525 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 BHLHE41Q9C0J9 482 aaPredicted RBP16.79■□□□□ 0.28
PNKP-213ENST00000599543 DUSP22Q9NRW4 184 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 ATAD3AQ9NVI7 634 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 FBXO34Q9NWN3 711 aa16.79■□□□□ 0.28
PNKP-213ENST00000599543 A0A1W2PQD3 144 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 TNFSF11O14788 317 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 UBDO15205 165 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 POLR3GO15318 223 aaPredicted RBP16.78■□□□□ 0.28
PNKP-213ENST00000599543 CPSF4O95639 269 aaKnown RBP16.78■□□□□ 0.28
PNKP-213ENST00000599543 OPN1LWP04000 364 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 ATP6V1C1P21283 382 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 C21orf58P58505 322 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 RAC1P63000 192 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 CTU2Q2VPK5 515 aaKnown RBP16.78■□□□□ 0.28
PNKP-213ENST00000599543 FAM174BQ3ZCQ3 159 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 SPDYE7PQ495Y7 208 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 SHEQ5VZ18 495 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 ESPNLQ6ZVH7 1005 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 CXorf67Q86X51 503 aaPredicted RBP16.78■□□□□ 0.28
PNKP-213ENST00000599543 P3H2Q8IVL5 708 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 OR9I1Q8NGQ6 314 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 B4GALNT2Q8NHY0 566 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 OR5P2Q8WZ92 322 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 CDS1Q92903 461 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 PIGTQ969N2 578 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 NPAS1Q99742 590 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 TMEM185BQ9H7F4 350 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 UBTD1Q9HAC8 227 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 TCF7L2Q9NQB0 619 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 FGFR1OP2Q9NVK5 253 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 CLEC4AQ9UMR7 237 aa16.78■□□□□ 0.28
PNKP-213ENST00000599543 RAI1Q7Z5J4 1906 aaPredicted RBP16.77■□□□□ 0.28
PNKP-213ENST00000599543 DYNC1I1O14576 645 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 ADAMDEC1O15204 470 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 ARHGEF9O43307 516 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 CXCL13O43927 109 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 SMPD2O60906 423 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 SS18L1O75177 396 aaPredicted RBP16.77■□□□□ 0.28
PNKP-213ENST00000599543 C1QCP02747 245 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 VIMP08670 466 aaKnown RBP16.77■□□□□ 0.28
PNKP-213ENST00000599543 FPR1P21462 350 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 PSMA4P25789 261 aaKnown RBP16.77■□□□□ 0.28
PNKP-213ENST00000599543 S100A3P33764 101 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 HBA1P69905 142 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 TP53BP2Q13625 1128 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 CD226Q15762 336 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 EXOSC6Q5RKV6 272 aaKnown RBP16.77■□□□□ 0.28
PNKP-213ENST00000599543 PDSS1Q5T2R2 415 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 HBMQ6B0K9 141 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 BIVMQ86UB2 503 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 LRRC34Q8IZ02 419 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 ZNF527Q8NB42 609 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 OR56A1Q8NGH5 318 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 OR4A15Q8NGL6 344 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 OR2V1Q8NHB1 315 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 ADGRG7Q96K78 797 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 C18orf12Q96KH6 178 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 CCL19Q99731 98 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms