RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 PSMB1P20618 241 aaKnown RBP8.75□□□□□ -1.01
VRK3-216ENST00000599342 SLC7A1P30825 629 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 ARRB2P32121 409 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 HBA1P69905 142 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 SELENBP1Q13228 472 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 CBFBQ13951 182 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 PDCD2Q16342 344 aaPredicted RBP8.75□□□□□ -1.01
VRK3-216ENST00000599342 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.75□□□□□ -1.01
VRK3-216ENST00000599342 CBLN3Q6UW01 205 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 CLEC9AQ6UXN8 241 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 ZNF704Q6ZNC4 412 aaPredicted RBP8.75□□□□□ -1.01
VRK3-216ENST00000599342 PLEKHM3Q6ZWE6 761 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 FCRLAQ7L513 359 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 YTHDF3Q7Z739 585 aaKnown RBP8.75□□□□□ -1.01
VRK3-216ENST00000599342 WFDC8Q8IUA0 241 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 RIMKLAQ8IXN7 391 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 ATP6V1C2Q8NEY4 427 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 TOR1AIP2Q8NFQ8 470 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 OR5D16Q8NGK9 328 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 RNF128Q8TEB7 428 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 ZFP90Q8TF47 636 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 AENQ8WTP8 325 aaKnown RBP8.75□□□□□ -1.01
VRK3-216ENST00000599342 ABHD3Q8WU67 409 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 ROBO4Q8WZ75 1007 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 SLC35G5Q96KT7 338 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 MARK4Q96L34 752 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 MRGPRX4Q96LA9 322 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 PPP1R36Q96LQ0 422 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 Q96MF0 132 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 SMR3AQ99954 134 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 KLHDC3Q9BQ90 382 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 TACO1Q9BSH4 297 aaKnown RBP8.75□□□□□ -1.01
VRK3-216ENST00000599342 SRXN1Q9BYN0 137 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 KLHL13Q9P2N7 655 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 ICAM5Q9UMF0 924 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 PCDHGB4Q9UN71 923 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 GPR52Q9Y2T5 361 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 DTNAQ9Y4J8 743 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 ACTL7BQ9Y614 415 aa8.75□□□□□ -1.01
VRK3-216ENST00000599342 ZNF469Q96JG9 3925 aaPredicted RBP8.75□□□□□ -1.01
VRK3-216ENST00000599342 ABCA4P78363 2273 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 RNF103-CHMP3A0A140T963 221 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 WDR91A4D1P6 747 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 RNASET2O00584 256 aaKnown RBP8.74□□□□□ -1.01
VRK3-216ENST00000599342 ZNF264O43296 627 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 OIP5O43482 229 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 TYROBPO43914 113 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 EIF4E2O60573 245 aaKnown RBP8.74□□□□□ -1.01
VRK3-216ENST00000599342 CYP7B1O75881 506 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 PRKD3O94806 890 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 THBDP07204 575 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 CREB1P16220 341 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 PRKCAP17252 672 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 MATN1P21941 496 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 LOXP28300 417 aaPredicted RBP8.74□□□□□ -1.01
VRK3-216ENST00000599342 SHC1P29353 583 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 ETV4P43268 484 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 CLDN8P56748 225 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 C21orf58P58505 322 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 RPS26P62854 115 aaKnown RBP8.74□□□□□ -1.01
VRK3-216ENST00000599342 EMX2Q04743 252 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 LTBQ06643 244 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 GPR68Q15743 365 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 CHI3L2Q15782 390 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 TOMM34Q15785 309 aaPredicted RBP8.74□□□□□ -1.01
VRK3-216ENST00000599342 SMU1Q2TAY7 513 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 NDUFAF6Q330K2 333 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 KRT71Q3SY84 523 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 TMEM176BQ3YBM2 270 aaPredicted RBP8.74□□□□□ -1.01
VRK3-216ENST00000599342 PDZK1Q5T2W1 519 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 OR4F3Q6IEY1 312 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 ALKBH2Q6NS38 261 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 C3orf33Q6P1S2 294 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 PRSS57Q6UWY2 283 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 TFAP2EQ6VUC0 442 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 C22orf34Q6ZV56 151 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 Q71RC1 249 aaPredicted RBP8.74□□□□□ -1.01
VRK3-216ENST00000599342 C16orf62Q7Z3J2 963 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 CLECL1Q8IZS7 167 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 KIRREL3Q8IZU9 778 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 SLC43A2Q8N370 569 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 STEAP2Q8NFT2 490 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 OR4A15Q8NGL6 344 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 OR5W2Q8NH69 310 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 GPR119Q8TDV5 335 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 NUDT8Q8WV74 236 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 TMEM171Q8WVE6 324 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 PLPPR2Q96GM1 343 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 PKNOX2Q96KN3 472 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 ZIM3Q96PE6 472 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 SDF2Q99470 211 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 BDH2Q9BUT1 245 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 HDHD5Q9BXW7 423 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 DPY30Q9C005 99 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 NMUR2Q9GZQ4 415 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 CXorf56Q9H5V9 222 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 GP6Q9HCN6 339 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 EXD2Q9NVH0 621 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 ASIC5Q9NY37 505 aa8.74□□□□□ -1.01
VRK3-216ENST00000599342 KCNE3Q9Y6H6 103 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms