RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 EXD2Q9NVH0 621 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 KCNE5Q9UJ90 142 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 MCTS1Q9ULC4 181 aaKnown RBP13.51□□□□□ -0.25
LIG1-215ENST00000597901 CLEC4AQ9UMR7 237 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 PROCRQ9UNN8 238 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 PCNX3Q9H6A9 2034 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 SERINC4A6NH21 518 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 HDAC3O15379 428 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 ZNF264O43296 627 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 ERLIN1O75477 346 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 STX11O75558 287 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 GOSR1O95249 250 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 AK1P00568 194 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 HRGP04196 525 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 ALDOCP09972 364 aaKnown RBP13.5□□□□□ -0.25
LIG1-215ENST00000597901 OR12D1P0DN82 309 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 POU2F1P14859 743 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 DNASE1P24855 282 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 KCNJ5P48544 419 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 CLNS1AP54105 237 aaKnown RBP13.5□□□□□ -0.25
LIG1-215ENST00000597901 SUMO3P55854 103 aaPredicted RBP13.5□□□□□ -0.25
LIG1-215ENST00000597901 NME5P56597 212 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 FOXF1Q12946 379 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 ZNF141Q15928 474 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 PDZK1Q5T2W1 519 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 AP1ARQ63HQ0 302 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 HEPHL1Q6MZM0 1159 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 OR5W2Q8NH69 310 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 RFWD2Q8NHY2 731 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 ARSGQ96EG1 525 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 GMPPAQ96IJ6 420 aaPredicted RBP13.5□□□□□ -0.25
LIG1-215ENST00000597901 KLHL15Q96M94 604 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 DOCK7Q96N67 2140 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 MANSC1Q9H8J5 431 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 PLEKHF2Q9H8W4 249 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 AIG1Q9NVV5 245 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 MKLN1Q9UL63 735 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 PLEKHA6Q9Y2H5 1048 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 GPC6Q9Y625 555 aaPredicted RBP13.5□□□□□ -0.25
LIG1-215ENST00000597901 CCDC168Q8NDH2 2452 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 SPG11Q96JI7 2443 aa13.5□□□□□ -0.25
LIG1-215ENST00000597901 GOLGA8QA0A0J9YX86 632 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 GOLGA8OA6NCC3 632 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 GOLGA8NF8WBI6 632 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 C16orf97H3BN30 126 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 UGT2B17O75795 530 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 AGR2O95994 175 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 PLGP00747 810 aaPredicted RBP13.49□□□□□ -0.25
LIG1-215ENST00000597901 KITP10721 976 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 PRKCAP17252 672 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 EPHA3P29320 983 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 SHC1P29353 583 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 IL12AP29459 219 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 SFTPDP35247 375 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 UGT2B10P36537 528 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 CTBP2P56545 445 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 POU4F3Q15319 338 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 DPY19L1Q2PZI1 675 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 TMEM176BQ3YBM2 270 aaPredicted RBP13.49□□□□□ -0.25
LIG1-215ENST00000597901 FAM174BQ3ZCQ3 159 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 SAXO2Q658L1 398 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 ATG16L1Q676U5 607 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 GTF2IRD2BQ6EKJ0 949 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 C16orf62Q7Z3J2 963 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 GTF2IRD2Q86UP8 949 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 ATP6V1C2Q8NEY4 427 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 TOR1AIP2Q8NFQ8 470 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 ROBO4Q8WZ75 1007 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 RAB8BQ92930 207 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 TLCD1Q96CP7 247 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 THUMPD3Q9BV44 507 aaKnown RBP13.49□□□□□ -0.25
LIG1-215ENST00000597901 LAT2Q9GZY6 243 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 CXXC4Q9H2H0 198 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 GLRX2Q9NS18 164 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 KLHL28Q9NXS3 571 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 NKIRAS1Q9NYS0 192 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 BTNL2Q9UIR0 455 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 EMC9Q9Y3B6 208 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 TESMINQ9Y4I5 508 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 GPR45Q9Y5Y3 372 aa13.49□□□□□ -0.25
LIG1-215ENST00000597901 E9PBE3 544 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 SLCO1B7G3V0H7 640 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 SS18L1O75177 396 aaPredicted RBP13.48□□□□□ -0.25
LIG1-215ENST00000597901 NTN1O95631 604 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 C1QCP02747 245 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 GUSBP08236 651 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 UBL4AP11441 157 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 ELK4P28324 431 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 QPRTQ15274 297 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 MAPK14Q16539 360 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 SLC25A53Q5H9E4 307 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 ATAD3BQ5T9A4 648 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 ANKRD34AQ69YU3 496 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 TNFAIP8L2Q6P589 184 aaPredicted RBP13.48□□□□□ -0.25
LIG1-215ENST00000597901 OR6K3Q8NGY3 331 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 RAB3IL1Q8TBN0 382 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 ROPN1LQ96C74 230 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 ZG16BQ96DA0 208 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 NEURL3Q96EH8 262 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms