RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 NINJ1Q92982 152 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 MAELQ96JY0 434 aaKnown RBP9.44□□□□□ -0.9
CCDC9-203ENST00000596938 SLC35G5Q96KT7 338 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 MRGPRX4Q96LA9 322 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 GPATCH1Q9BRR8 931 aaKnown RBP9.44□□□□□ -0.9
CCDC9-203ENST00000596938 SLC39A3Q9BRY0 314 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 PRRG4Q9BZD6 226 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF350Q9GZX5 532 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 SAP130Q9H0E3 1048 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 OR51I1Q9H343 314 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 PLSCR4Q9NRQ2 329 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 GLRX2Q9NS18 164 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 KCNE5Q9UJ90 142 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 ITGB1BP2Q9UKP3 347 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 EDARQ9UNE0 448 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 FREM3P0C091 2139 aa9.44□□□□□ -0.9
CCDC9-203ENST00000596938 INTS1Q8N201 2190 aaKnown RBP9.44□□□□□ -0.9
CCDC9-203ENST00000596938 ANKHD1Q8IWZ3 2542 aaKnown RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 MED12Q93074 2177 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 NPIPA5A0A0B4J1W7 369 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 SH3D21A4FU49 640 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 CCDC154A6NI56 674 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 NPIPA7E9PJI5 369 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 CXCL13O43927 109 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 SMNDC1O75940 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 SYNGR4O95473 234 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 NUDT14O95848 222 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 OPN1LWP04000 364 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 IL6P05231 212 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 PGRP06401 933 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 PABPC4LP0CB38 370 aaKnown RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 NPIPA8P0DM63 369 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 OR12D1P0DN82 309 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 KITP10721 976 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 UBL4AP11441 157 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 NID1P14543 1247 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 IDO1P14902 403 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 PRKCAP17252 672 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 IL12AP29459 219 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 CD79BP40259 229 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 SLC6A8P48029 635 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 FAM27E3Q08E93 113 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 CBFBQ13951 182 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 GPR68Q15743 365 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 TOMM34Q15785 309 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 PDZK1Q5T2W1 519 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 HBMQ6B0K9 141 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF474Q6S9Z5 364 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 EIF3MQ7L2H7 374 aaKnown RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 C16orf62Q7Z3J2 963 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 TRIML2Q8N7C3 387 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 FBXO27Q8NI29 283 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 PIWIL2Q8TC59 973 aaKnown RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 RAB8BQ92930 207 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 ROPN1LQ96C74 230 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 GMPPAQ96IJ6 420 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 KLHL15Q96M94 604 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 OR52E6Q96RD3 313 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 PANX1Q96RD7 426 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 ZBTB18Q99592 522 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 SLC35A5Q9BS91 424 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 LAT2Q9GZY6 243 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 TIGARQ9NQ88 270 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 MARCOQ9UEW3 520 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 MKLN1Q9UL63 735 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 MCTS1Q9ULC4 181 aaKnown RBP9.43□□□□□ -0.9
CCDC9-203ENST00000596938 LIPT1Q9Y234 373 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 CCDC168Q8NDH2 2452 aa9.43□□□□□ -0.9
CCDC9-203ENST00000596938 GOLGA8QA0A0J9YX86 632 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 GOLGA8OA6NCC3 632 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 GJE1A6NN92 205 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 GOLGA8NF8WBI6 632 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 C16orf97H3BN30 126 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 TNFSF11O14788 317 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 CASKO14936 926 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 KIAA0513O60268 411 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 SS18L1O75177 396 aaPredicted RBP9.42□□□□□ -0.9
CCDC9-203ENST00000596938 SLC22A3O75751 556 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 CSTAP01040 98 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 CHI3L1P36222 383 aaPredicted RBP9.42□□□□□ -0.9
CCDC9-203ENST00000596938 UGT2B10P36537 528 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 MAGEA8P43361 318 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 CASP9P55211 416 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 NME5P56597 212 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 SIRPAP78324 504 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 FOXF1Q12946 379 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 SKP2Q13309 424 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 GSTA3Q16772 222 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 PDCD4Q53EL6 469 aaKnown RBP9.42□□□□□ -0.9
CCDC9-203ENST00000596938 NXNQ6DKJ4 435 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 TYW3Q6IPR3 259 aaKnown RBP9.42□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF621Q6ZSS3 439 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 MAVSQ7Z434 540 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF614Q8N883 585 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF610Q8N9Z0 462 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 OR6K3Q8NGY3 331 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 PMM1Q92871 262 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 ARL8AQ96BM9 186 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF524Q96C55 264 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 TRNT1Q96Q11 434 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms