RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 DND1Q8IYX4 353 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 TMEM156Q8N614 296 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 GATSQ8NAP1 163 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 HGDQ93099 445 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 SLC35B4Q969S0 331 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 NRBF2Q96F24 287 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 CIB1Q99828 191 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF559Q9BR84 538 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 TACO1Q9BSH4 297 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 TMEM27Q9HBJ8 222 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 C8orf4Q9NR00 106 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 RHCGQ9UBD6 479 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 TMCC3Q9ULS5 477 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 U3KQV3 271 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 LRBAP50851 2863 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 CPSF4LA6NMK7 179 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF891A8MT65 544 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ALG1L2C9J202 215 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 NKX2-8O15522 239 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF264O43296 627 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 FADS1O60427 444 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 H1F0P07305 194 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 FAM87AP0C7U9 286 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 UBTFL6P0CB48 400 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 UBL4AP11441 157 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 FPR1P21462 350 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ITGA3P26006 1051 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 SOX3P41225 446 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 IST1P53990 364 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 RRADP55042 308 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 HOXC5Q00444 222 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 PIN1Q13526 163 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 GK3PQ14409 553 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 NPTX1Q15818 432 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF791Q3KP31 576 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ENTPD8Q5MY95 495 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 SHQ1Q6PI26 577 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 LYPD8Q6UX82 237 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 IL20RBQ6UXL0 311 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 APOOLQ6UXV4 268 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 PLEKHM3Q6ZWE6 761 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 GALNT4Q8N4A0 578 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 SIRT6Q8N6T7 355 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 POGLUT1Q8NBL1 392 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 CLEC1AQ8NC01 280 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 PIK3C3Q8NEB9 887 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 OR52J3Q8NH60 311 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 BRIX1Q8TDN6 353 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 EXTL1Q92935 676 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 SPACA9Q96E40 222 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 PRRC1Q96M27 445 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 NODALQ96S42 347 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 EPYCQ99645 322 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ARHGAP9Q9BRR9 750 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 PRR14Q9BWN1 585 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 POLR2J2Q9GZM3 115 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 LAT2Q9GZY6 243 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 LHPPQ9H008 270 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 POLR2J3Q9H1A7 115 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 SDHAF3Q9NRP4 125 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ACER3Q9NUN7 267 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 DNAJB12Q9NXW2 375 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 STMN3Q9NZ72 180 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 TEKT2Q9UIF3 430 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 OAZ3Q9UMX2 235 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 A4GNTQ9UNA3 340 aa11.96□□□□□ -0.49
SHKBP1-209ENST00000595803 ARGFXA6NJG6 315 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 PDLIM1O00151 329 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 FFAR1O14842 300 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 SCO2O43819 266 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 EIF4E2O60573 245 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 FMO6PO60774 539 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 OR6B1O95007 311 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 ANGPTL1O95841 491 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 PRKAR1AP10644 381 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 EVI2BP34910 448 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF136P52737 540 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 HMGA2P52926 109 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 COPZ1P61923 177 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 ST3GAL3Q11203 375 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 SRSF6Q13247 344 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 OR1Q1Q15612 314 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 NTRK2Q16620 822 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 ACER2Q5QJU3 275 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 DCST1Q5T197 706 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 OTUD3Q5T2D3 398 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 B3GNTL1Q67FW5 361 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 PPP4R4Q6NUP7 873 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 TMEM179BQ7Z7N9 219 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 PACS2Q86VP3 889 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 MISPQ8IVT2 679 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 ARMC10Q8N2F6 343 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 CBR4Q8N4T8 237 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 FAM26EQ8N5C1 309 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 PACRGLQ8N7B6 248 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 GIPC3Q8TF64 312 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 PHF10Q8WUB8 498 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 ALPK1Q96QP1 1244 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC29A1Q99808 456 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 TRIM2Q9C040 744 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms