RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 HPNP05981 417 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 CD247P20963 164 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 DSCR4P56555 118 aaPredicted RBP20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 ZSWIM7Q19AV6 140 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 PGM2L1Q6PCE3 622 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 OR5W2Q8NH69 310 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 PINK1Q9BXM7 581 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 DEFB127Q9H1M4 99 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 LRMDAQ9H2I8 198 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 PTGES2Q9H7Z7 377 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 DPP4P27487 766 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 SLC10A1Q14973 349 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 LRRC23Q53EV4 343 aaPredicted RBP20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 ARSKQ6UWY0 536 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 FAM83FQ8NEG4 500 aaPredicted RBP20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 GPR119Q8TDV5 335 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 SLX1AQ9BQ83 275 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 WFDC6Q9BQY6 131 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 GORASP2Q9H8Y8 452 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 ACKR4Q9NPB9 350 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 OLAHQ9NV23 265 aa20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 MRPS18CQ9Y3D5 142 aaKnown RBP20.48■□□□□ 0.87
SNRNP70-204ENST00000595231 ZNF407Q9C0G0 2248 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 ANKUB1A6NFN9 424 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 NPIPA5E9PKD4 350 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 ME2P23368 584 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 SRD5A2P31213 254 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 TDGF1P3P51864 188 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 SUMO3P55854 103 aaPredicted RBP20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 TOMM34Q15785 309 aaPredicted RBP20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 CYBRD1Q53TN4 286 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 ASRGL1Q7L266 308 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 BHLHE22Q8NFJ8 381 aaPredicted RBP20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 TOR1AIP2Q8NFQ8 470 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 CPT1CQ8TCG5 803 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 SLC26A7Q8TE54 656 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 ARMC7Q9H6L4 198 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 AGPAT4Q9NRZ5 378 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 NPIPA1Q9UND3 350 aa20.47■□□□□ 0.87
SNRNP70-204ENST00000595231 B8ZZF3 427 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 TRAPPC6AO75865 159 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 LGI1O95970 557 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 IFNA14P01570 189 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 FESP07332 822 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 C8BP07358 591 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 GKN3PP0CG01 181 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 ACAA2P42765 397 aaKnown RBP20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 FOXK1P85037 733 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 MS4A2Q01362 244 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 BNIP2Q12982 314 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 TRIM25Q14258 630 aaKnown RBP20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 GANABQ14697 944 aaKnown RBP20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 TOMM20Q15388 145 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 EIPR1Q53HC9 387 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 YRDCQ86U90 279 aaKnown RBP20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 TMCO5AQ8N6Q1 288 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 RASSF5Q8WWW0 418 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 OR2B2Q9GZK3 357 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 PLSCR2Q9NRY7 297 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 MAGEL2Q9UJ55 1249 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 SNX13Q9Y5W8 968 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 LIPGQ9Y5X9 500 aa20.46■□□□□ 0.87
SNRNP70-204ENST00000595231 SHANK1Q9Y566 2161 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 ARPC2O15144 300 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 FRS3O43559 492 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 CDC40O60508 579 aaKnown RBP eCLIP20.45■□□□□ 0.865e-8■■□□□ 12.2
SNRNP70-204ENST00000595231 IGHG3P01860 377 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 LINGO3P0C6S8 592 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 PRG2P13727 222 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 CCR4P51679 360 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 SELENOWP63302 87 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 CBFBQ13951 182 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 ELOAQ14241 798 aaKnown RBP20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 OR10Q1Q8NGQ4 319 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 SLC35B4Q969S0 331 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 NPAS1Q99742 590 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 MED17Q9NVC6 651 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 TAS2R10Q9NYW0 307 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 VDAC3Q9Y277 283 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 SVILO95425 2214 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 DNAJC13O75165 2243 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 SYT5O00445 386 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 AP3D1O14617 1153 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 WISP1O95388 367 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 NUDT14O95848 222 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 SERPINA1P01009 418 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 RYKP34925 604 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 ZNF136P52737 540 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 EPS8Q12929 822 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 PLPPR5Q32ZL2 321 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 WIPI1Q5MNZ9 446 aaPredicted RBP20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 CBLL1Q75N03 491 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 ZNF440Q8IYI8 595 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 FAM162AQ96A26 154 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 GPR137Q96N19 417 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 DCAF13Q9NV06 445 aaKnown RBP20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 DKKL1Q9UK85 242 aa20.45■□□□□ 0.86
SNRNP70-204ENST00000595231 CFAP73A6NFT4 308 aa20.44■□□□□ 0.86
SNRNP70-204ENST00000595231 TMEM44Q2T9K0 475 aa20.44■□□□□ 0.86
SNRNP70-204ENST00000595231 ULK2Q8IYT8 1036 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms