RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 DHDDSQ86SQ9 333 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 VRK2Q86Y07 508 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 PM20D2Q8IYS1 436 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 ZNF808Q8N4W9 903 aaPredicted RBP13.87□□□□□ -0.19
USE1-206ENST00000595101 DPP10Q8N608 796 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 TMCO5AQ8N6Q1 288 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 CNOT9Q92600 299 aaKnown RBP13.87□□□□□ -0.19
USE1-206ENST00000595101 RND1Q92730 232 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 THUMPD3Q9BV44 507 aaKnown RBP13.87□□□□□ -0.19
USE1-206ENST00000595101 RLIMQ9NVW2 624 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 P2RX2Q9UBL9 471 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.87□□□□□ -0.19
USE1-206ENST00000595101 CYSRT1A8MQ03 144 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 ANGPT2O15123 496 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 EPPINO95925 133 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 GUSBP08236 651 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 PEPDP12955 493 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 POU3F2P20265 443 aaPredicted RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 SHC1P29353 583 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 ZNF41P51814 821 aaPredicted RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 AGFG1P52594 562 aaKnown RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 SMSP52788 366 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 MTPNP58546 118 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 TMEM211Q6ICI0 200 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 GTPBP8Q8N3Z3 284 aaPredicted RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 C9orf106Q8NAJ2 232 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 OR5W2Q8NH69 310 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 ZNF845Q96IR2 970 aaPredicted RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 CGREF1Q99674 301 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 TREX2Q9BQ50 279 aaPredicted RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 CPPED1Q9BRF8 314 aaPredicted RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 MTHFD2LQ9H903 347 aaPredicted RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 CHST2Q9Y4C5 530 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 DSPPQ9NZW4 1301 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 CLCA1A8K7I4 914 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 H0Y3Z8 333 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 C19orf84I3L1E1 186 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 RPS4Y1P22090 263 aaKnown RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 RYKP34925 604 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 ANXA11P50995 505 aaKnown RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 GNGT1P63211 74 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 TXNL4AP83876 142 aaKnown RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 NFYCQ13952 458 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 ADRM1Q16186 407 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 GLYR1Q49A26 553 aaPredicted RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 NSUN5P2Q63ZY6 315 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 XKRXQ6PP77 449 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 EIF3MQ7L2H7 374 aaKnown RBP13.86□□□□□ -0.19
USE1-206ENST00000595101 SPATA21Q7Z572 469 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 ADGRE4PQ86SQ3 457 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 GGNQ86UU5 652 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 EID3Q8N140 333 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 POU5F2Q8N7G0 328 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 FAM71CQ8NEG0 241 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 FBXO27Q8NI29 283 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 ZPLD1Q8TCW7 415 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 LAT2Q9GZY6 243 aa13.86□□□□□ -0.19
USE1-206ENST00000595101 NKX2-6A6NCS4 301 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 EIF4E2O60573 245 aaKnown RBP13.85□□□□□ -0.19
USE1-206ENST00000595101 TGM6O95932 706 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 BMP2P12643 396 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 PRKCAP17252 672 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 GPX2P18283 190 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 GCKP35557 465 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 FADDQ13158 208 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 QPRTQ15274 297 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 MTDHQ86UE4 582 aaKnown RBP13.85□□□□□ -0.19
USE1-206ENST00000595101 SNX32Q86XE0 403 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 NFKBIDQ8NI38 313 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 TSPEARQ8WU66 669 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 ANKRD27Q96NW4 1050 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 A4GALTQ9NPC4 353 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 DNAJB12Q9NXW2 375 aaKnown RBP13.85□□□□□ -0.19
USE1-206ENST00000595101 GMEB1Q9Y692 573 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 CELSR2Q9HCU4 2923 aa13.85□□□□□ -0.19
USE1-206ENST00000595101 A0A087WZY1 265 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 GMNCA6NCL1 334 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 FAM90A27PA6NNH2 459 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 PRSS44E7EML9 344 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 DNAJA2O60884 412 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 CLDN14O95500 239 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 HOXD4P09016 255 aaPredicted RBP13.84□□□□□ -0.19
USE1-206ENST00000595101 IL7RP16871 459 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 CRISP3P54108 245 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 FOXF2Q12947 444 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 MRPL2Q5T653 305 aaKnown RBP13.84□□□□□ -0.19
USE1-206ENST00000595101 REP15Q6BDI9 236 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 POMZP3Q6PJE2 187 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 TREML1Q86YW5 311 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 CLIP4Q8N3C7 705 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 OR52P1PQ8NH57 321 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 CA5BP1Q8WTZ4 195 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 FIG4Q92562 907 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 ZBTB8AQ96BR9 441 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 PIF1Q9H611 641 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 COQ3Q9NZJ6 369 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 CLCF1Q9UBD9 225 aa13.84□□□□□ -0.19
USE1-206ENST00000595101 CD8B2A6NJW9 211 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 FXYD1O00168 92 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 AP3D1O14617 1153 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms