RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CBX1P83916 185 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 SRYQ05066 204 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 FADDQ13158 208 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 ART3Q13508 389 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 RAET1LQ5VY80 246 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 NSUN5P2Q63ZY6 315 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 HIST2H2BCQ6DN03 193 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 POMZP3Q6PJE2 187 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 PLXDC2Q6UX71 529 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 PIGWQ7Z7B1 504 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 CCDC71Q8IV32 467 aaPredicted RBP13.82□□□□□ -0.2
TRIM47-206ENST00000592942 LIX1LQ8IVB5 337 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 GTPBP8Q8N3Z3 284 aaPredicted RBP13.82□□□□□ -0.2
TRIM47-206ENST00000592942 ZNF614Q8N883 585 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 OR5W2Q8NH69 310 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 RND1Q92730 232 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 PMM1Q92871 262 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 MAL2Q969L2 176 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 ELAC2Q9BQ52 826 aaKnown RBP13.82□□□□□ -0.2
TRIM47-206ENST00000592942 PIGQQ9BRB3 760 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 CPPED1Q9BRF8 314 aaPredicted RBP13.82□□□□□ -0.2
TRIM47-206ENST00000592942 PLEKHB1Q9UF11 243 aaPredicted RBP13.82□□□□□ -0.2
TRIM47-206ENST00000592942 Q9UFV3 132 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 CHST2Q9Y4C5 530 aa13.82□□□□□ -0.2
TRIM47-206ENST00000592942 ETV2O00321 342 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 SNX3O60493 162 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 CSTAP01040 98 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 BCHEP06276 602 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 UBL4AP11441 157 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 PEPDP12955 493 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 IL11P20809 199 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 COL8A1P27658 744 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 ADSLP30566 484 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 TIMP3P35625 211 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 SUMO3P55854 103 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 SELPLGQ14242 412 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 ADRM1Q16186 407 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 SLC25A53Q5H9E4 307 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 RPS26P11Q5JNZ5 115 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 EIF3MQ7L2H7 374 aaKnown RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 MAMDC2Q7Z304 686 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 NAXEQ8NCW5 288 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 TNIP2Q8NFZ5 429 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 CNOT9Q92600 299 aaKnown RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 ZBTB8AQ96BR9 441 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 SDCCAG3Q96C92 435 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 TMEM19Q96HH6 336 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 ANKRD27Q96NW4 1050 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 CGREF1Q99674 301 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 TREX2Q9BQ50 279 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 THUMPD3Q9BV44 507 aaKnown RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 TRIM8Q9BZR9 551 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 CALHM2Q9HA72 323 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 BCL2L10Q9HD36 194 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 A4GALTQ9NPC4 353 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 THUMPD1Q9NXG2 353 aaKnown RBP13.81□□□□□ -0.2
TRIM47-206ENST00000592942 P2RX2Q9UBL9 471 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 AP4B1Q9Y6B7 739 aa13.81□□□□□ -0.2
TRIM47-206ENST00000592942 A0A0G2JPF8 293 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 LOC100653049A0A140TA62 436 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 HNRNPCL2B2RXH8 293 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 HNRNPCL3B7ZW38 293 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 ANGPT2O15123 496 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 HNRNPCL1O60812 293 aaKnown RBP13.8□□□□□ -0.2
TRIM47-206ENST00000592942 KRT34O76011 436 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 UBTFL6P0CB48 400 aaPredicted RBP13.8□□□□□ -0.2
TRIM47-206ENST00000592942 HNRNPCL4P0DMR1 293 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 ARAFP10398 606 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 ZNF17P17021 662 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 PRKCAP17252 672 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 GRNP28799 593 aaKnown RBP13.8□□□□□ -0.2
TRIM47-206ENST00000592942 GCKP35557 465 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 RIPPLY2Q5TAB7 128 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 SPATA21Q7Z572 469 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 DHDDSQ86SQ9 333 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 GGNQ86UU5 652 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 TOR1AIP2Q8NFQ8 470 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 LILRB4Q8NHJ6 448 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 RNF145Q96MT1 663 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 TRIB1Q96RU8 372 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 FAM107BQ9H098 131 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 RAD21L1Q9H4I0 556 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 ARMCX1Q9P291 453 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 CLCF1Q9UBD9 225 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 SLC35A3Q9Y2D2 325 aa13.8□□□□□ -0.2
TRIM47-206ENST00000592942 SPTAN1Q13813 2472 aaKnown RBP13.79□□□□□ -0.2
TRIM47-206ENST00000592942 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.79□□□□□ -0.2
TRIM47-206ENST00000592942 MBD3L4A6NDZ8 208 aaPredicted RBP13.79□□□□□ -0.2
TRIM47-206ENST00000592942 MBD3L3A6NE82 208 aaPredicted RBP13.79□□□□□ -0.2
TRIM47-206ENST00000592942 MBD3L5A6NJ08 208 aaPredicted RBP13.79□□□□□ -0.2
TRIM47-206ENST00000592942 CLCA1A8K7I4 914 aa13.79□□□□□ -0.2
TRIM47-206ENST00000592942 H3BML4 177 aa13.79□□□□□ -0.2
TRIM47-206ENST00000592942 FXYD1O00168 92 aa13.79□□□□□ -0.2
TRIM47-206ENST00000592942 PGM3O95394 542 aa13.79□□□□□ -0.2
TRIM47-206ENST00000592942 CLDN14O95500 239 aa13.79□□□□□ -0.2
TRIM47-206ENST00000592942 TGM6O95932 706 aa13.79□□□□□ -0.2
TRIM47-206ENST00000592942 OPN1LWP04000 364 aa13.79□□□□□ -0.2
TRIM47-206ENST00000592942 POU3F2P20265 443 aaPredicted RBP13.79□□□□□ -0.2
TRIM47-206ENST00000592942 PPIBP23284 216 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms