RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 MKLN1Q9UL63 735 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 CLEC4AQ9UMR7 237 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 F8P00451 2351 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 ABCA4P78363 2273 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 SERINC4A6NH21 518 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 TRPC5OSA6NMA1 111 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 ADAMDEC1O15204 470 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 EFNA2O43921 213 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 STX11O75558 287 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 C1QCP02747 245 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 UBL4AP11441 157 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 ME2P23368 584 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 SFTPDP35247 375 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 CD79BP40259 229 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 EIF1P41567 113 aaKnown RBP12.44□□□□□ -0.42
APOC1-208ENST00000592535 IST1P53990 364 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 ZNF141Q15928 474 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 FBXW10Q5XX13 1052 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 TNFAIP8L2Q6P589 184 aaPredicted RBP12.44□□□□□ -0.42
APOC1-208ENST00000592535 ESPNLQ6ZVH7 1005 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 C16orf62Q7Z3J2 963 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 SPATA19Q7Z5L4 167 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 LILRA2Q8N149 483 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 TMCO5AQ8N6Q1 288 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 ZNF610Q8N9Z0 462 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 FBXO27Q8NI29 283 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 RAB3IL1Q8TBN0 382 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 GPR119Q8TDV5 335 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 RAB8BQ92930 207 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 KLHL15Q96M94 604 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 CCDC115Q96NT0 180 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 DACH2Q96NX9 599 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 SLC35A5Q9BS91 424 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 NMUR2Q9GZQ4 415 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 ZNF350Q9GZX5 532 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 MANSC1Q9H8J5 431 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 EXD2Q9NVH0 621 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 PAQR5Q9NXK6 330 aaPredicted RBP12.44□□□□□ -0.42
APOC1-208ENST00000592535 GPR45Q9Y5Y3 372 aa12.44□□□□□ -0.42
APOC1-208ENST00000592535 MED13LQ71F56 2210 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 ZNF195O14628 629 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 ZNF264O43296 627 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 EIF4E2O60573 245 aaKnown RBP12.43□□□□□ -0.42
APOC1-208ENST00000592535 UGT2B17O75795 530 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 SYNGR4O95473 234 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 CD8BP10966 210 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 PRKCAP17252 672 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 ELK4P28324 431 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 CHI3L1P36222 383 aaPredicted RBP12.43□□□□□ -0.42
APOC1-208ENST00000592535 CCR4P51679 360 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 ART1P52961 327 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 FUT5Q11128 374 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 FGFBP1Q14512 234 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 POU4F3Q15319 338 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 SLC9B1Q4ZJI4 515 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 HBMQ6B0K9 141 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 FAM214BQ7L5A3 538 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 MAVSQ7Z434 540 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 OR5W2Q8NH69 310 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 XAGE5Q8WWM1 108 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 OSTF1Q92882 214 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 ARSGQ96EG1 525 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 NEURL3Q96EH8 262 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 INPP5KQ9BT40 448 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 BTNL2Q9UIR0 455 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 ST6GALNAC2Q9UJ37 374 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 MCTS1Q9ULC4 181 aaKnown RBP12.43□□□□□ -0.42
APOC1-208ENST00000592535 PROCRQ9UNN8 238 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 TESMINQ9Y4I5 508 aa12.43□□□□□ -0.42
APOC1-208ENST00000592535 GPC6Q9Y625 555 aaPredicted RBP12.43□□□□□ -0.42
APOC1-208ENST00000592535 HRNRQ86YZ3 2850 aaPredicted RBP12.42□□□□□ -0.42
APOC1-208ENST00000592535 PRAMEF27A3QJZ7 478 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 SLCO1B7G3V0H7 640 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 KIAA0513O60268 411 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 SS18L1O75177 396 aaPredicted RBP12.42□□□□□ -0.42
APOC1-208ENST00000592535 CYP7B1O75881 506 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 NTN1O95631 604 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 AGR2O95994 175 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 PLGP00747 810 aaPredicted RBP12.42□□□□□ -0.42
APOC1-208ENST00000592535 HRGP04196 525 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 PGRP06401 933 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 POU2F1P14859 743 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 ADH6P28332 368 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 CCKARP32238 428 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 CDKN2CP42773 168 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 KCNJ5P48544 419 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 PCYT1AP49585 367 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 KHKP50053 298 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 SKP2Q13309 424 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 QPRTQ15274 297 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 MAPK14Q16539 360 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 PDSS1Q5T2R2 415 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 ATAD3BQ5T9A4 648 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 NXNQ6DKJ4 435 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 TYW3Q6IPR3 259 aaKnown RBP12.42□□□□□ -0.42
APOC1-208ENST00000592535 SPNS3Q6ZMD2 512 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 HMGN2P46Q86SG4 172 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 ATP6V1C2Q8NEY4 427 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 TOR1AIP2Q8NFQ8 470 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms