RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 RINLQ6ZS11 566 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 ATCAYQ86WG3 371 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 SPPL2CQ8IUH8 684 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 RBM15BQ8NDT2 890 aaKnown RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 FAM71CQ8NEG0 241 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 NEIL3Q8TAT5 605 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 CDRT15Q96T59 188 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 KCTD14Q9BQ13 255 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 RLIMQ9NVW2 624 aa17.38■□□□□ 0.37
DDX39A-214ENST00000590556 DNAJB12Q9NXW2 375 aaKnown RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 RPH3AQ9Y2J0 694 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-214ENST00000590556 HEATR5AQ86XA9 2040 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 A0A1B0GVC2 190 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 CDHR4A6H8M9 788 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 GSTA4O15217 222 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 PRKAR1BP31321 381 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 GCKP35557 465 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 CPOXP36551 454 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 RBPJQ06330 500 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 CBFBQ13951 182 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 GLYR1Q49A26 553 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-214ENST00000590556 CCDC80Q76M96 950 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 CLIP4Q8N3C7 705 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 GPR119Q8TDV5 335 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 ARSGQ96EG1 525 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 KLHDC3Q9BQ90 382 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 EXOSC3Q9NQT5 275 aaKnown RBP17.37■□□□□ 0.37
DDX39A-214ENST00000590556 MED17Q9NVC6 651 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 VDAC3Q9Y277 283 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 SLC6A5Q9Y345 797 aa17.37■□□□□ 0.37
DDX39A-214ENST00000590556 AQP7O14520 342 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 MFN2O95140 757 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 PLAURQ03405 335 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 SAMD4BQ5PRF9 694 aaKnown RBP17.36■□□□□ 0.37
DDX39A-214ENST00000590556 RAET1LQ5VY80 246 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 DHRS4L2Q6PKH6 230 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 ZNF440Q8IYI8 595 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 RNF148Q8N7C7 305 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 BHLHE22Q8NFJ8 381 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-214ENST00000590556 TNIP2Q8NFZ5 429 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 SLC26A7Q8TE54 656 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 SFXN2Q96NB2 322 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 PACSIN3Q9UKS6 424 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 GTF3C1Q12789 2109 aa17.36■□□□□ 0.37
DDX39A-214ENST00000590556 CFAP73A6NFT4 308 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 ZNHIT1O43257 154 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 TPST1O60507 370 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 OPN1SWP03999 348 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 PGCP20142 388 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 RYKP34925 604 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 PTGS2P35354 604 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 SLC6A8P48029 635 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 DMTNQ08495 405 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 MRPL49Q13405 166 aaKnown RBP17.35■□□□□ 0.37
DDX39A-214ENST00000590556 PLPPR5Q32ZL2 321 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 FGD2Q7Z6J4 655 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 GRAMD2AQ8IUY3 354 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 CHERPQ8IWX8 916 aaKnown RBP17.35■□□□□ 0.37
DDX39A-214ENST00000590556 SMYD1Q8NB12 490 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 OR5M1Q8NGP8 315 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 FIG4Q92562 907 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 ZBTB8AQ96BR9 441 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 TAMM41Q96BW9 452 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 PIGQQ9BRB3 760 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 PINK1Q9BXM7 581 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 RSPO3Q9BXY4 272 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-214ENST00000590556 C1orf21Q9H246 121 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 TAS2R1Q9NYW7 299 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 SPRR3Q9UBC9 169 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 SLC13A4Q9UKG4 626 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 CHST2Q9Y4C5 530 aa17.35■□□□□ 0.37
DDX39A-214ENST00000590556 OR14I1A6ND48 311 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 NPIPA2E9PIF3 369 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 NPIPA3F8WFD2 350 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 CXCR6O00574 342 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 IFNA14P01570 189 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 LINGO3P0C6S8 592 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 ABOP16442 354 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 GNLYP22749 145 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 KDELR2P33947 212 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 B3GALT5-AS1P59052 145 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 QPRTQ15274 297 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 TOMM34Q15785 309 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-214ENST00000590556 SPATS1Q496A3 300 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 AAGABQ6PD74 315 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 C6orf89Q6UWU4 347 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 ZNF550Q7Z398 422 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 GTPBP8Q8N3Z3 284 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-214ENST00000590556 ZNF563Q8TA94 476 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 MED12Q93074 2177 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 ABTB1Q969K4 478 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-214ENST00000590556 SARAFQ96BY9 339 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 KLHL28Q9NXS3 571 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 TNFRSF10DQ9UBN6 386 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 CD300AQ9UGN4 299 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 ACAD8Q9UKU7 415 aa17.34■□□□□ 0.37
DDX39A-214ENST00000590556 OR2M5A3KFT3 312 aa17.33■□□□□ 0.36
DDX39A-214ENST00000590556 C7orf72A4D263 438 aa17.33■□□□□ 0.36
DDX39A-214ENST00000590556 SHISA8B8ZZ34 492 aa17.33■□□□□ 0.36
DDX39A-214ENST00000590556 AP3D1O14617 1153 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms