RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 HPGDP15428 266 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 LCN1P31025 176 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 EIF1P41567 113 aaKnown RBP12.33□□□□□ -0.44
SF3A2-205ENST00000590034 SERPINB4P48594 390 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 DNAJB13P59910 316 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 RPL38P63173 70 aaKnown RBP12.33□□□□□ -0.44
SF3A2-205ENST00000590034 ITGADQ13349 1161 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 NDUFAF6Q330K2 333 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 TMEM176BQ3YBM2 270 aaPredicted RBP12.33□□□□□ -0.44
SF3A2-205ENST00000590034 RFTN2Q52LD8 501 aaPredicted RBP12.33□□□□□ -0.44
SF3A2-205ENST00000590034 DNAJC14Q6Y2X3 702 aaPredicted RBP12.33□□□□□ -0.44
SF3A2-205ENST00000590034 HIPK1Q86Z02 1210 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 ZFP90Q8TF47 636 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 HSD17B8Q92506 261 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 ANP32BQ92688 251 aaKnown RBP12.33□□□□□ -0.44
SF3A2-205ENST00000590034 CDS1Q92903 461 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 CCDC126Q96EE4 140 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 TRAF4Q9BUZ4 470 aaPredicted RBP12.33□□□□□ -0.44
SF3A2-205ENST00000590034 BTBD2Q9BX70 525 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 CXorf36Q9H7Y0 433 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 HHATLQ9HCP6 504 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 YAE1D1Q9NRH1 226 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 ACSS1Q9NUB1 689 aaPredicted RBP12.33□□□□□ -0.44
SF3A2-205ENST00000590034 GIN1Q9NXP7 522 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 NPAP1Q9NZP6 1156 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 DCDC2Q9UHG0 476 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 PRSS50Q9UI38 385 aa12.33□□□□□ -0.44
SF3A2-205ENST00000590034 SHISA9B4DS77 424 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 H3BQF6 201 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 TLX2O43763 284 aaPredicted RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 GPRIN2O60269 458 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 PLIN3O60664 434 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 GLRA3O75311 464 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 LYZL6O75951 148 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 TP53P04637 393 aaPredicted RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 HMGN2P05204 90 aaKnown RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 YES1P07947 543 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 FAM153BP0C7A2 387 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 PRKCAP17252 672 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 PTNP21246 168 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 C21orf58P58505 322 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 POU6F2P78424 691 aaPredicted RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 LASP1Q14847 261 aaKnown RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 P2RY6Q15077 328 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 FAM153CQ494X1 144 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 KLHL26Q53HC5 615 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 ZCCHC12Q6PEW1 402 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 TRMT10CQ7L0Y3 403 aaKnown RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 BHLHA15Q7RTS1 189 aaPredicted RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 DTX2Q86UW9 622 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 TDRPQ86YL5 185 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 ATP6V1C2Q8NEY4 427 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 PHOSPHO1Q8TCT1 267 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 GPR119Q8TDV5 335 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 REXO5Q96IC2 774 aaKnown RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 PSD2Q9BQI7 771 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 TXLNGYQ9BZA5 131 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 ANKZF1Q9H8Y5 726 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 BCO1Q9HAY6 547 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 GP6Q9HCN6 339 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 NGBQ9NPG2 151 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 TIGARQ9NQ88 270 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 DUSP22Q9NRW4 184 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 ZCCHC3Q9NUD5 404 aaKnown RBP12.32□□□□□ -0.44
SF3A2-205ENST00000590034 OXSMQ9NWU1 459 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 CARD8Q9Y2G2 431 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 FIS1Q9Y3D6 152 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 KCNE3Q9Y6H6 103 aa12.32□□□□□ -0.44
SF3A2-205ENST00000590034 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.443e-8■■■■■ 36.3
SF3A2-205ENST00000590034 NBEAL1Q6ZS30 2694 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 IGHV4-30-2A0A087WSY4 118 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 A0A1W2PNR3 127 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 NPIPB9F8W1W9 429 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 SLC28A1O00337 649 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 LSM1O15116 133 aaKnown RBP12.31□□□□□ -0.44
SF3A2-205ENST00000590034 RGS14O43566 566 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 PRKD3O94806 890 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 NUDT14O95848 222 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 OR3A2P47893 321 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 P2RX1P51575 399 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 NAA20P61599 178 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 CFAP157Q5JU67 520 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 LRIG3Q6UXM1 1119 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 Q6ZT83 130 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
SF3A2-205ENST00000590034 ZNF300Q96RE9 604 aaPredicted RBP12.31□□□□□ -0.44
SF3A2-205ENST00000590034 STACQ99469 402 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 PIGUQ9H490 435 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
SF3A2-205ENST00000590034 SNX8Q9Y5X2 465 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 ACTL7BQ9Y614 415 aa12.31□□□□□ -0.44
SF3A2-205ENST00000590034 GPC6Q9Y625 555 aaPredicted RBP12.31□□□□□ -0.44
SF3A2-205ENST00000590034 GJE1A6NN92 205 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 ESPNB1AK53 854 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 TMEM233B4DJY2 109 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 C9JVG2 144 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 KIF2AO00139 706 aaPredicted RBP12.3□□□□□ -0.44
SF3A2-205ENST00000590034 AZIN1O14977 448 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 SMAD9O15198 467 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms