RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 NPIPA7E9PJI5 369 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 ATP6V1G2-DDX39BF2Z307 99 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 RGS14O43566 566 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 IGHV3-9P01782 118 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 JUNP05412 331 aaKnown RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 C2P06681 752 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TACSTD2P09758 323 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 NPIPA8P0DM63 369 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 CREB1P16220 341 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TSPAN8P19075 237 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 APEX1P27695 318 aaKnown RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 CRABP2P29373 138 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 NTF4P34130 210 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 MPIP34949 423 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 SPRP35270 261 aaPredicted RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 MAP3K8P41279 467 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 ZNF41P51814 821 aaPredicted RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 PHC1P78364 1004 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 RASGEF1BQ0VAM2 473 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TRIP10Q15642 601 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TOMM34Q15785 309 aaPredicted RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 GGTA1PQ4G0N0 100 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 MIDNQ504T8 468 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 GLE1Q53GS7 698 aaKnown RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 ARL13AQ5H913 290 aaPredicted RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 GRTP1Q5TC63 336 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 HIST2H2BDQ6DRA6 164 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 KLHL17Q6TDP4 642 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 OR2L13Q8N349 312 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 SLC43A2Q8N370 569 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 ATP6V1C2Q8NEY4 427 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 FBXO27Q8NI29 283 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 C16orf78Q8WTQ4 265 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 SELENOMQ8WWX9 145 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 PHF21BQ96EK2 531 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 MRGPRX4Q96LA9 322 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 OSBPL9Q96SU4 736 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TRMOQ9BU70 441 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TRIM31Q9BZY9 425 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 GLIPR2Q9H4G4 154 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 ELOVL6Q9H5J4 265 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 MYNNQ9NPC7 610 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TIGARQ9NQ88 270 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 NTMQ9P121 344 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TXNDC16Q9P2K2 825 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 GMPR2Q9P2T1 348 aaKnown RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 MCM8Q9UJA3 840 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 TNPO3Q9Y5L0 923 aaKnown RBP6.95□□□□□ -1.3
VAT1-207ENST00000589828 FKBP7Q9Y680 259 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 GOLGA6L10A0A0M3HER8 536 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 PCDH7O60245 1069 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 CYTIPO60759 359 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 NGFRP08138 427 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 ITGA5P08648 1049 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 BMP4P12644 408 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 GIFP27352 417 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 RNF144AP50876 292 aaPredicted RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 NCBP2P52298 156 aaKnown RBP eCLIP6.94□□□□□ -1.3
VAT1-207ENST00000589828 ARFIP2P53365 341 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 HILS1P60008 231 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 RAC3P60763 192 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 CCNIQ14094 377 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 SLC29A2Q14542 456 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 PDCD2Q16342 344 aaPredicted RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 GABRA6Q16445 453 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 TECRLQ5HYJ1 363 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 FBXW9Q5XUX1 488 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 METTL2BQ6P1Q9 378 aaKnown RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 CYS1Q717R9 158 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 SSX8Q7RTT4 187 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 CTAGE3PQ8IX95 158 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 KLHL7Q8IXQ5 586 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 SAMD14Q8IZD0 417 aaPredicted RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 PLD6Q8N2A8 252 aaKnown RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 ZFP90Q8TF47 636 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 PYROXD1Q8WU10 500 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 CDKL2Q92772 493 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 HOXB13Q92826 284 aaPredicted RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 ELP4Q96EB1 424 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 APIPQ96GX9 242 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 MUS81Q96NY9 551 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 SNX18Q96RF0 628 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 BBS4Q96RK4 519 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 VRK1Q99986 396 aaPredicted RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 ZNF747Q9BV97 191 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 BRF2Q9HAW0 419 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 GIMAP4Q9NUV9 329 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 SENP1Q9P0U3 644 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 KLHL9Q9P2J3 617 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 VPS29Q9UBQ0 182 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 MRTO4Q9UKD2 239 aaKnown RBP6.94□□□□□ -1.3
VAT1-207ENST00000589828 JRKLQ9Y4A0 524 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 PLCE1Q9P212 2302 aa6.94□□□□□ -1.3
VAT1-207ENST00000589828 PRKDCP78527 4128 aaKnown RBP6.93□□□□□ -1.3
VAT1-207ENST00000589828 CIB4A0PJX0 185 aa6.93□□□□□ -1.3
VAT1-207ENST00000589828 CCT8L1PA6NM43 557 aa6.93□□□□□ -1.3
VAT1-207ENST00000589828 ZNF724A8MTY0 619 aa6.93□□□□□ -1.3
VAT1-207ENST00000589828 OR4F21O95013 312 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms