RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	LGI1	O95970	557 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	ALPP	P05187	535 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	EMD	P50402	254 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	CDH12	P55289	794 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	TEK	Q02763	1124 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	YOD1	Q5VVQ6	348 aa	Predicted RBP	14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	TYW3	Q6IPR3	259 aa	Known RBP	14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	NRARP	Q7Z6K4	114 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	RBM18	Q96H35	190 aa	Known RBP	14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	CCDC74B	Q96LY2	380 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	CITED4	Q96RK1	184 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	SDF2	Q99470	211 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	SPATA5L1	Q9BVQ7	753 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF350	Q9GZX5	532 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	SLC22A4	Q9H015	551 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	ACAD8	Q9UKU7	415 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	TBC1D24	Q9ULP9	559 aa		14.27	□□□□□ -0.13
DDX39A-209	ENST00000589318	IGKV3D-11	A0A0A0MRZ8	115 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318		A0A1B0GX78	115 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318		M0R3H8	397 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	CTDSP2	O14595	271 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	SSTR4	P31391	388 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	FAP	Q12884	760 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	IKZF1	Q13422	519 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	TIGD6	Q17RP2	521 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	VRK2	Q86Y07	508 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR52J3	Q8NH60	311 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	VANGL1	Q8TAA9	524 aa	Predicted RBP	14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	CRELD1	Q96HD1	420 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	DMRTB1	Q96MA1	342 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	DGAT2	Q96PD7	388 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	PITX2	Q99697	317 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	PINK1	Q9BXM7	581 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	C12orf4	Q9NQ89	552 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	SIDT1	Q9NXL6	827 aa	Known RBP	14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	TNFRSF10D	Q9UBN6	386 aa		14.26	□□□□□ -0.13
DDX39A-209	ENST00000589318	COL27A1	Q8IZC6	1860 aa	Predicted RBP	14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318		A0A0G2JMP0	313 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	CENPVL1	A0A0U1RR11	272 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	NTN3	O00634	580 aa	Predicted RBP	14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	NKX2-2	O95096	273 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	ATXN8OS	P0DMR3	200 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	LIPA	P38571	399 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	LIMK1	P53667	647 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	DAB2	P98082	770 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	PSG6	Q00889	435 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	GANAB	Q14697	944 aa	Known RBP	14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	EXOC3L2	Q2M3D2	409 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	DCST2	Q5T1A1	773 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	NXNL2	Q5VZ03	156 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	DBX2	Q6ZNG2	339 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	GLRX5	Q86SX6	157 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SLITRK4	Q8IW52	837 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SNAPC3	Q92966	411 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	OMA1	Q96E52	524 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	LOXL4	Q96JB6	756 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	VSTM2L	Q96N03	204 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SDHC	Q99643	169 aa	Predicted RBP	14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	DPYSL5	Q9BPU6	564 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SAP130	Q9H0E3	1048 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF304	Q9HCX3	659 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	PLSCR3	Q9NRY6	295 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	FBXO34	Q9NWN3	711 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	RHCG	Q9UBD6	479 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	DTX4	Q9Y2E6	619 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	MMACHC	Q9Y4U1	282 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	COL5A1	P20908	1838 aa	Predicted RBP	14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	CCDC182	A6NF36	153 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SYT5	O00445	386 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	TIAF1	O95411	115 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	CLPS	P04118	112 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	LCK	P06239	509 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	GADD45A	P24522	165 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	GALNS	P34059	522 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	ACY1	Q03154	408 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SCN1B	Q07699	218 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	FUT7	Q11130	342 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	ASAH1	Q13510	395 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SERTAD2	Q14140	314 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	MICA	Q29983	383 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF311	Q5JNZ3	666 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	PLA2G2C	Q5R387	149 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	C1orf189	Q5VU69	101 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	RHBDD2	Q6NTF9	364 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZC3H14	Q6PJT7	736 aa	Known RBP	14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	QSOX2	Q6ZRP7	698 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	GALNT5	Q7Z7M9	940 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR6T1	Q8NGN1	323 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR6C1	Q96RD1	312 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	LMF2	Q9BU23	707 aa	Known RBP	14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SYNDIG1	Q9H7V2	258 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	FOLH1B	Q9HBA9	442 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	SLC22A11	Q9NSA0	550 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	RLIM	Q9NVW2	624 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	A4GNT	Q9UNA3	340 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	BOLA1	Q9Y3E2	137 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	WDR45	Q9Y484	360 aa		14.25	□□□□□ -0.13
DDX39A-209	ENST00000589318	RALGAPA1	Q6GYQ0	2036 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	GXYLT2	A0PJZ3	443 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318		E9PQ18	207 aa		14.24	□□□□□ -0.13

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