RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PADI1Q9ULC6 663 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 SLC7A7Q9UM01 511 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 NTNG1Q9Y2I2 539 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 PTRH2Q9Y3E5 179 aaKnown RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 PCDHGA6Q9Y5G7 932 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 ASH1LQ9NR48 2969 aaKnown RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 A0A0B4J2E0 115 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 A0A1B0GX12 115 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 A0A1W2PQ72 361 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 OR6C70A6NIJ9 312 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CHP2O43745 196 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 KLF7O75840 302 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CLPTM1O96005 669 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 UMODP07911 640 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 RAB40ALP0C0E4 278 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CCDC159P0C7I6 412 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 UBL4AP11441 157 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CHMP24386 653 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 FOLR3P41439 243 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CXCR4P61073 352 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 TEKQ02763 1124 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 FOXD4Q12950 439 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 C6orf141Q5SZD1 244 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 HES3Q5TGS1 186 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 C6orf15Q6UXA7 325 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 ISLR2Q6UXK2 745 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 NKAIN4Q8IVV8 208 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 WDR36Q8NI36 951 aaKnown RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 MPP4Q96JB8 637 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 HS6ST2Q96MM7 605 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 ADOQ96SZ5 270 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 PRSS27Q9BQR3 290 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 NRSN2Q9GZP1 204 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 POLR1BQ9H9Y6 1135 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 A0A087WXM4 84 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 TRBV11-1A0A0K0K1C0 115 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 TEX51A0A1B0GUA7 166 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CDC14CA4D256 554 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 A6NHS1 94 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 TRIM64CA6NLI5 447 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 ZAR1LA6NP61 321 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 ALG1L2C9J202 215 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 PRKNO60260 465 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 ICOSLGO75144 302 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 ZFAND5O76080 213 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 DKK1O94907 266 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 LYPD3O95274 346 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 NAGAP17050 411 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 FPR3P25089 353 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 ELK4P28324 431 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 OMPP47874 163 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 GSSP48637 474 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 HLCSP50747 726 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 RNF144AP50876 292 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 GABARAPL2P60520 117 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CDC42P60953 191 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 TSPAN31Q12999 210 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CDK5R2Q13319 367 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 EFR3AQ14156 821 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 MAD2L1BPQ15013 274 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 PCOLCEQ15113 449 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 PTGES3Q15185 160 aaKnown RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 EXT1Q16394 746 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 MEP1AQ16819 746 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CTU2Q2VPK5 515 aaKnown RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 DHRS13Q6UX07 377 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 PRR22Q8IZ63 422 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 C8orf44Q96CB5 159 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 CCNL2Q96S94 520 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-203ENST00000589116 SPRY4Q9C004 299 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 B3GNT4Q9C0J1 378 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 ZNF700Q9H0M5 742 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 WASF3Q9UPY6 502 aa11.08□□□□□ -0.64
CCBE1-203ENST00000589116 A0A1B0GWA3 101 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 ZNF264O43296 627 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 MPZL2O60487 215 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 PPM1BO75688 479 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 SMNDC1O75940 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCBE1-203ENST00000589116 ANGPTL1O95841 491 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 CRHBPP24387 322 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 RBM34P42696 430 aaKnown RBP11.07□□□□□ -0.64
CCBE1-203ENST00000589116 RPL5P46777 297 aaKnown RBP11.07□□□□□ -0.64
CCBE1-203ENST00000589116 TMED10P49755 219 aaKnown RBP11.07□□□□□ -0.64
CCBE1-203ENST00000589116 COPZ1P61923 177 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 CSNK2BP67870 215 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 SKP2Q13309 424 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 SLX4IPQ5VYV7 408 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 ULK3Q6PHR2 472 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 RASSF6Q6ZTQ3 369 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 CCDC71Q8IV32 467 aaPredicted RBP11.07□□□□□ -0.64
CCBE1-203ENST00000589116 ENTHD1Q8IYW4 607 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 CACTIN-AS1Q8N1I8 211 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 FAM81AQ8TBF8 368 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 PHOSPHO1Q8TCT1 267 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 TMEM255BQ8WV15 326 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 DNAJA4Q8WW22 397 aaPredicted RBP11.07□□□□□ -0.64
CCBE1-203ENST00000589116 TMEM239Q8WW34 195 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms