RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ZNF613Q6PF04 617 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 FAM111BQ6SJ93 734 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 ARL9Q6T311 187 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 GLCCI1Q86VQ1 547 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 OR4C6Q8NH72 309 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 PHYHIPQ92561 330 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 KISS1RQ969F8 398 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-206ENST00000587730 ZNF559Q9BR84 538 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 TEKT2Q9UIF3 430 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 C19orf53Q9UNZ5 99 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-206ENST00000587730 TCF20Q9UGU0 1960 aaKnown RBP17.25■□□□□ 0.35
DDX39A-206ENST00000587730 A0A1B0GTQ1 180 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 SC5DO75845 299 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 SNAPC5O75971 98 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 EIF4EP06730 217 aaKnown RBP17.25■□□□□ 0.35
DDX39A-206ENST00000587730 CEACAM5P06731 702 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 IFI30P13284 250 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 TBXA2RP21731 343 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 PTGER1P34995 402 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 OR3A3P47888 321 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 MMP15P51511 669 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 FOXK2Q01167 660 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 LTB4RQ15722 352 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 SLC22A10Q63ZE4 541 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 LAMTOR1Q6IAA8 161 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 CEACAM19Q7Z692 300 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 C7orf61Q8IZ16 206 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 C9orf62Q8N4C0 152 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 TMEM99Q8N816 258 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 CDRT4Q8N9R6 151 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 TRMT10AQ8TBZ6 339 aaKnown RBP17.25■□□□□ 0.35
DDX39A-206ENST00000587730 NACC2Q96BF6 587 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 ASB16Q96NS5 453 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 TEAD3Q99594 435 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 TIMP4Q99727 224 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 MACROD1Q9BQ69 325 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 DPH1Q9BZG8 443 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 ZNF624Q9P2J8 865 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-206ENST00000587730 STON1Q9Y6Q2 735 aa17.25■□□□□ 0.35
DDX39A-206ENST00000587730 A0A0A6YYJ9 748 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 FAM183AA6NL82 134 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 MID1O15344 667 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 FZD7O75084 574 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 SBK2P0C263 348 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 RAB3BP20337 219 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 PEBP1P30086 187 aaKnown RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 EVI2BP34910 448 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 RPS7P62081 194 aaKnown RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 ACTA2P62736 377 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 ACTG2P63267 376 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 MADCAM1Q13477 382 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 INSL4Q14641 139 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 OR1Q1Q15612 314 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 AMZ1Q400G9 498 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 ESCO2Q56NI9 601 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 FAM78AQ5JUQ0 283 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 EXOSC6Q5RKV6 272 aaKnown RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 ANKRD54Q6NXT1 300 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 AMIGO1Q86WK6 493 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 NR2C2APQ86WQ0 139 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 ADAMTS14Q8WXS8 1223 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 BPIFA2Q96DR5 249 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 GPR137Q96N19 417 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 IFT27Q9BW83 186 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 GHITMQ9H3K2 345 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 AKAP7Q9P0M2 348 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 NTNG1Q9Y2I2 539 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 SPACA6W5XKT8 324 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 RANBP2P49792 3224 aaKnown RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 PTPRSQ13332 1948 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 CTDSPLO15194 276 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 B3GALT2O43825 422 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 GATBO75879 557 aaKnown RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 SHC1P29353 583 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 RBM34P42696 430 aaKnown RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 AGFG1P52594 562 aaKnown RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 DUSP5Q16690 384 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 ZSWIM7Q19AV6 140 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 KLHL12Q53G59 568 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 DMKNQ6E0U4 476 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 ARHGAP11AQ6P4F7 1023 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 SYS1Q8N2H4 156 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 TOMM5Q8N4H5 51 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 PHF21AQ96BD5 680 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 SCARF2Q96GP6 870 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 RADILQ96JH8 1075 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 TMEM27Q9HBJ8 222 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 LYRM4Q9HD34 91 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 WDR70Q9NW82 654 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 CLDND1Q9NY35 253 aa17.24■□□□□ 0.35
DDX39A-206ENST00000587730 SIRT4Q9Y6E7 314 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-206ENST00000587730 CEP290O15078 2479 aa17.23■□□□□ 0.35
DDX39A-206ENST00000587730 A0A1W2PS29 197 aa17.23■□□□□ 0.35
DDX39A-206ENST00000587730 CDHR4A6H8M9 788 aa17.23■□□□□ 0.35
DDX39A-206ENST00000587730 LRRN3E7EW58 273 aa17.23■□□□□ 0.35
DDX39A-206ENST00000587730 EEF1E1O43324 174 aaKnown RBP17.23■□□□□ 0.35
DDX39A-206ENST00000587730 GSTZ1O43708 216 aaPredicted RBP17.23■□□□□ 0.35
DDX39A-206ENST00000587730 STATHP02808 62 aa17.23■□□□□ 0.35
DDX39A-206ENST00000587730 GUSBP08236 651 aa17.23■□□□□ 0.35
DDX39A-206ENST00000587730 ZNF888P0CJ79 500 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms