RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 JMJD6Q6NYC1 403 aaPredicted RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 FAHD1Q6P587 224 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 C5orf46Q6UWT4 87 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 NUP54Q7Z3B4 507 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 THAP5Q7Z6K1 395 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 LACC1Q8IV20 430 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 CYP4Z2PQ8N1L4 340 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 ZNF786Q8N393 782 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 PARP8Q8N3A8 854 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 ZNF321PQ8N8H1 164 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 GATSQ8NAP1 163 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 OR9Q2Q8NGE9 314 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 OR4C15Q8NGM1 316 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 APOBEC4Q8WW27 367 aaKnown RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 ADAMTS14Q8WXS8 1223 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 TTC9Q92623 222 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 HPS1Q92902 700 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 GTPBP3Q969Y2 492 aaKnown RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 DHRS1Q96LJ7 313 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 ZNF570Q96NI8 536 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SLC38A2Q96QD8 506 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 FEVQ99581 238 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 DGCR6LQ9BY27 220 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 GABARAPL3Q9BY60 117 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 NRSN2Q9GZP1 204 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 ADNPQ9H2P0 1102 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 PTGES2Q9H7Z7 377 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SMURF2Q9HAU4 748 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 ZBTB20Q9HC78 741 aaPredicted RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 BATF3Q9NR55 127 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 ACER3Q9NUN7 267 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 TBC1D23Q9NUY8 699 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 RLIMQ9NVW2 624 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 FBXO34Q9NWN3 711 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 FAM118AQ9NWS6 357 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 HPF1Q9NWY4 346 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 DNAJB12Q9NXW2 375 aaKnown RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 SCN3BQ9NY72 215 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 VNN3Q9NY84 501 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 FOXJ2Q9P0K8 574 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 MYOTQ9UBF9 498 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 A4GNTQ9UNA3 340 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 YARS2Q9Y2Z4 477 aaKnown RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 SNX5Q9Y5X3 404 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SPIN1Q9Y657 262 aaPredicted RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 HS3ST3B1Q9Y662 390 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 HSPE1-MOB4S4R3N1 261 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 PCNX2A6NKB5 2137 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 TRBV4-1A0A0J9YWV2 114 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 PRAMEF25A6NGN4 478 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 ALG1L2C9J202 215 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 SOCS6O14544 535 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 SLC30A4O14863 429 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 TSPAN2O60636 221 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 CNOT3O75175 753 aaKnown RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 ITGA10O75578 1167 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 KLF7O75840 302 aaPredicted RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 OR2J2O76002 312 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 ZIC2O95409 532 aaPredicted RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 IGKV1D-16P01601 117 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 UMODP07911 640 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 IFI30P13284 250 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 OSMP13725 252 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 POU2F1P14859 743 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 PRKACGP22612 351 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 CXCR1P25024 350 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 ITGA3P26006 1051 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 POU1F1P28069 291 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 MSX1P28360 303 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 SOX18P35713 384 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 IDH2P48735 452 aaKnown RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 MASP1P48740 699 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 DAPP51397 102 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 SMSP52788 366 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 CLDN6P56747 220 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 RPS18P62269 152 aaKnown RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 GUCA2AQ02747 115 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 TSPAN31Q12999 210 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 MAPK14Q16539 360 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 MEP1AQ16819 746 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 TMEM44Q2T9K0 475 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.68□□□□□ -1.5
LIG3-206ENST00000586058 KLHL26Q53HC5 615 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 NHSL2Q5HYW2 709 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 RBM48Q5RL73 367 aaKnown RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 AP1ARQ63HQ0 302 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 LCN10Q6JVE6 187 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 PODNL1Q6PEZ8 512 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 IGF2-ASQ6U949 168 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 MBOAT2Q6ZWT7 520 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 GDF7Q7Z4P5 450 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 TMEM179BQ7Z7N9 219 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 MRGPREQ86SM8 312 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 SLCO6A1Q86UG4 719 aa5.68□□□□□ -1.5
LIG3-206ENST00000586058 RBM45Q8IUH3 476 aaKnown RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 APLFQ8IW19 511 aaPredicted RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 CHERPQ8IWX8 916 aaKnown RBP5.68□□□□□ -1.5
LIG3-206ENST00000586058 GPALPP1Q8IXQ4 340 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms