RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 HTR2BP41595 481 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SOX9P48436 509 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FOXK2Q01167 660 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 RUNX3Q13761 415 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 OR1Q1Q15612 314 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 MRPL2Q5T653 305 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FAM27D1Q5T7N8 215 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 RPL13AP3Q6NVV1 102 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PSRC1Q6PGN9 363 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ARL9Q6T311 187 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 IL20RBQ6UXL0 311 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 USP53Q70EK8 1073 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TPRA1Q86W33 373 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GPALPP1Q8IXQ4 340 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZNF619Q8N2I2 560 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 NECTIN4Q96NY8 510 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 NDC1Q9BTX1 674 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SLC17A9Q9BYT1 436 aa13.17□□□□□ -0.3
CDK5RAP3-237ENST00000585163 NOTOA8MTQ0 251 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 AKR7A2O43488 359 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 STX11O75558 287 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SC5DO75845 299 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SLC35G6P0C7Q6 338 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SMIM10L1P0DMW3 83 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 NID1P14543 1247 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ACSL1P33121 698 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 OR10A3P58181 314 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SIM1P81133 766 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DBPQ10586 325 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 BTBD16Q32M84 506 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TRMT12Q53H54 448 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GARNL3Q5VVW2 1013 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FBXO42Q6P3S6 717 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 THSD4Q6ZMP0 1018 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ASB18Q6ZVZ8 466 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TMPRSS11FQ6ZWK6 438 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CREB3L2Q70SY1 520 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SMIM10Q96HG1 83 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SERINC2Q96SA4 455 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 APOOQ9BUR5 198 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ABCG5Q9H222 651 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 KCNE5Q9UJ90 142 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZMIZ1Q9ULJ6 1067 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 C19orf53Q9UNZ5 99 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 A0A0G2JK05 382 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 A0A1W2PQU0 124 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CDHR4A6H8M9 788 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PRR23D1E9PI22 279 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SMLR1H3BR10 107 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PRR23D2P0DMB1 279 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CPMP14384 443 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 AHCYP23526 432 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FCARP24071 287 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 E2F1Q01094 437 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 RUNX2Q13950 521 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DEFB134Q4QY38 66 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CCDC58Q4VC31 144 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 EXOSC6Q5RKV6 272 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TANGO2Q6ICL3 276 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PXKQ7Z7A4 578 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ABHD4Q8TB40 342 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SNAPC3Q92966 411 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 BPIFA2Q96DR5 249 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TM4SF19Q96DZ7 209 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SCARF2Q96GP6 870 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 IFT27Q9BW83 186 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DAPP1Q9UN19 280 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SIGLEC7Q9Y286 467 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CHD9Q3L8U1 2897 aa13.16□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FMO6PO60774 539 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SBK2P0C263 348 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 IL9P15248 144 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 BTCP35070 178 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TAS2R43P59537 309 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SUZ12Q15022 739 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DCST2Q5T1A1 773 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FHL5Q5TD97 284 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CEACAM19Q7Z692 300 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DNAJC5GQ8N7S2 189 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 HYLS1Q96M11 299 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ABHD1Q96SE0 405 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FGF22Q9HCT0 170 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TBC1D29Q9UFV1 150 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SATB2Q9UPW6 733 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SLC35A3Q9Y2D2 325 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 RWDD3Q9Y3V2 267 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 C2orf16Q68DN1 1984 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 A0A0A6YYJ9 748 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TNFRSF10AO00220 468 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PEX12O00623 359 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DNAJB6O75190 326 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 EML2O95834 649 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 LAMP2P13473 410 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 NDUFS1P28331 727 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TLX1P31314 330 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SLC16A1P53985 500 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms