RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FAHD2BQ6P2I3 314 aaPredicted RBP3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 ACOT1Q86TX2 421 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 PRR22Q8IZ63 422 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 LRRC43Q8N309 656 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 OR51G2Q8NGK0 314 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 RAET1EQ8TD07 263 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 RSPH1Q8WYR4 309 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 THRSPQ92748 146 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 FAM122AQ96E09 287 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 FAHD2AQ96GK7 314 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 CELF6Q96J87 481 aaKnown RBP3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 IL4I1Q96RQ9 567 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 CHIAQ9BZP6 476 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 TMEM9Q9P0T7 183 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 ALG6Q9Y672 507 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 TNRQ92752 1358 aa3.99□□□□□ -1.77
SMARCE1-219ENST00000583294 TUBAL3A6NHL2 446 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 HDAC3O15379 428 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 ZSCAN12O43309 604 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 TBL1XO60907 577 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 TPSB2P20231 275 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 NT5EP21589 574 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 TBXA2RP21731 343 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 ADSSP30520 456 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 HPCAL1P37235 193 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 LYZP61626 148 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 RIPPLY1Q0D2K3 151 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 RAB40BQ12829 278 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 TPSAB1Q15661 275 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 KYAT1Q16773 422 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 SLC36A3Q495N2 470 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 GGTA1PQ4G0N0 100 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 NADK2Q4G0N4 442 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 ATF7IP2Q5U623 682 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 METTL11BQ5VVY1 283 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 FAM199XQ6PEV8 388 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 KCNIP4Q6PIL6 250 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 TFAP2EQ6VUC0 442 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 ZDHHC21Q8IVQ6 265 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 SPRYD4Q8WW59 207 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 MARC2Q969Z3 335 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 C16orf74Q96GX8 76 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 C12orf66Q96MD2 445 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 ZIM3Q96PE6 472 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 CITED1Q99966 193 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 CNPY3Q9BT09 278 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 WRAP73Q9P2S5 460 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 ZNF256Q9Y2P7 627 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 OR10H1Q9Y4A9 318 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 MAD1L1Q9Y6D9 718 aa3.98□□□□□ -1.77
SMARCE1-219ENST00000583294 ZNF705EA8MWA4 302 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 B4DXG7 233 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 KIF2AO00139 706 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 DNAH10OSP0CZ25 163 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 CPN1P15169 458 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 IGLL1P15814 213 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 PGCP20142 388 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 UQCRC2P22695 453 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 SOX6P35712 828 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 EFNA3P52797 238 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 OC90Q02509 493 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 AANATQ16613 207 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 SLC25A24Q6NUK1 477 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 CES3Q6UWW8 571 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 C16orf62Q7Z3J2 963 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 HSD17B13Q7Z5P4 300 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 VASH2Q86V25 355 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 MTURNQ8N3F0 131 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 C14orf178Q8N769 122 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 OR5L2Q8NGL0 311 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 OR2T34Q8NGX1 318 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 CTNNBL1Q8WYA6 563 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 RAB7BQ96AH8 199 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 FGGYQ96C11 551 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 PHYHIPLQ96FC7 376 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 B3GALT6Q96L58 329 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 TSGA13Q96PP4 275 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 ZNF184Q99676 751 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 TMEM117Q9H0C3 514 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 NXF5Q9H1B4 397 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 EHD1Q9H4M9 534 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 ELOVL3Q9HB03 270 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 ANGPTL2Q9UKU9 493 aa3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 UBQLN1Q9UMX0 589 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 TDRD6O60522 2096 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-219ENST00000583294 FRMPD4Q14CM0 1322 aa3.96□□□□□ -1.77
SMARCE1-219ENST00000583294 IGKV6D-41A0A0C4DH26 115 aa3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 PP2D1A8MPX8 630 aa3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 A8MU10 97 aa3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 XPO1O14980 1071 aaKnown RBP3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 BCAS1O75363 584 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 LYPLA1O75608 230 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 PSMA5P28066 241 aa3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 MXD4Q14582 209 aaPredicted RBP3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 LRRC36Q1X8D7 754 aa3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 LIPNQ5VXI9 398 aa3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 ATL3Q6DD88 541 aa3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 DNM1P46Q6ZS02 220 aa3.96□□□□□ -1.78
SMARCE1-219ENST00000583294 SH2D6Q7Z4S9 175 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms