RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PPIAL4AQ9Y536 164 aa2.38□□□□□ -2.03
COPS3-217ENST00000583160 PHIPQ8WWQ0 1821 aa2.38□□□□□ -2.03
COPS3-217ENST00000583160 SCN2AQ99250 2005 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 MYH13Q9UKX3 1938 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 ZNF320A2RRD8 509 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 DHRS7CA6NNS2 312 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 ABCD4O14678 606 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 ZNF263O14978 683 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 ATP6V1G1O75348 118 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 TIMP1P01033 207 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 PRMT2P55345 433 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 WDR43Q15061 677 aaKnown RBP eCLIP2.37□□□□□ -2.03
COPS3-217ENST00000583160 AARDQ4LEZ3 155 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 DCST2Q5T1A1 773 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 C11orf88Q6PI97 169 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 CXCL17Q6UXB2 119 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 PARGQ86W56 976 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 ZNF100Q8IYN0 542 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 ZNF786Q8N393 782 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 KIR2DL5BQ8NHK3 375 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 RNASE8Q8TDE3 154 aaKnown RBP2.37□□□□□ -2.03
COPS3-217ENST00000583160 NEIL2Q969S2 332 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 VPS39Q96JC1 886 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 SLC35E1Q96K37 410 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 TSPAN18Q96SJ8 248 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 CTRCQ99895 268 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 DEFB129Q9H1M3 183 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 PRO3102Q9H379 93 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 ZWILCHQ9H900 591 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 FBXW2Q9UKT8 454 aa2.37□□□□□ -2.03
COPS3-217ENST00000583160 RANBP2P49792 3224 aaKnown RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 C5orf51A6NDU8 294 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 E9PLD3 99 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 TBL1XO60907 577 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 FOXH1O75593 365 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 AKAP3O75969 853 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 WISP3O95389 354 aaPredicted RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 NME5P56597 212 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 NLRP11P59045 1033 aaKnown RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 TIMM10P62072 90 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 CCZ1BP86790 482 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 CCZ1P86791 482 aaPredicted RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 OTUD4Q01804 1114 aaKnown RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 OC90Q02509 493 aaPredicted RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 DAZ2Q13117 558 aaKnown RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 PDE7AQ13946 482 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 DPYSQ14117 519 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 KCNJ11Q14654 390 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 CYP51A1Q16850 503 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 KCTD19Q17RG1 926 aaPredicted RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 EOGTQ5NDL2 527 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 CYB5R2Q6BCY4 276 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 OR5M10Q6IEU7 315 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 TMED8Q6PL24 325 aaPredicted RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 ERO1BQ86YB8 467 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 NOL4LQ96MY1 436 aaPredicted RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 SMIM14Q96QK8 99 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 FAM213AQ9BRX8 229 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 RTBDNQ9BSG5 229 aaPredicted RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 MRPL9Q9BYD2 267 aaKnown RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 TRPV6Q9H1D0 765 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 DAZ3Q9NR90 486 aaKnown RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 FAM114A2Q9NRY5 505 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 DCAF13Q9NV06 445 aaKnown RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 EHFQ9NZC4 300 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 AKAP7Q9P0M2 348 aaPredicted RBP2.36□□□□□ -2.03
COPS3-217ENST00000583160 L3MBTL1Q9Y468 752 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 SNX5Q9Y5X3 404 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 LAMA3Q16787 3333 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 MYH2Q9UKX2 1941 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 GRIN2DO15399 1336 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 MROH5Q6ZUA9 1318 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 FANCIQ9NVI1 1328 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 SZT2Q5T011 3432 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 RFX7Q2KHR2 1363 aa2.36□□□□□ -2.03
COPS3-217ENST00000583160 FOCADQ5VW36 1801 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 ALPK3Q96L96 1907 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 IGKV2D-24A0A075B6R9 120 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 USP27XA6NNY8 438 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 TMEM110-MUSTN1A8MSY1 372 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 H0Y626 953 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 SNAI2O43623 268 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 TOXO94900 526 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 ANP32DO95626 131 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 IGFBP1P08833 259 aaPredicted RBP2.35□□□□□ -2.03
COPS3-217ENST00000583160 CDH5P33151 784 aaPredicted RBP2.35□□□□□ -2.03
COPS3-217ENST00000583160 PITPNBP48739 271 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 GPC3P51654 580 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 RPS6P62753 249 aaKnown RBP2.35□□□□□ -2.03
COPS3-217ENST00000583160 PPIL2Q13356 520 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 RCN2Q14257 317 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 ZNF630Q2M218 657 aaPredicted RBP2.35□□□□□ -2.03
COPS3-217ENST00000583160 ZNF699Q32M78 642 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 CMPK2Q5EBM0 449 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 APOBEC3HQ6NTF7 200 aaKnown RBP2.35□□□□□ -2.03
COPS3-217ENST00000583160 BNIPLQ7Z465 357 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 ANKRD23Q86SG2 305 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 TMEM110Q86TL2 294 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 PPP1R27Q86WC6 154 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms