RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	DHX35	Q9H5Z1	703 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PCDH18	Q9HCL0	1135 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	ETNK2	Q9NVF9	386 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	NKIRAS1	Q9NYS0	192 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PPP4R1L	Q9P1A2	415 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	KLHL13	Q9P2N7	655 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	MCTS1	Q9ULC4	181 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	CHMP2B	Q9UQN3	213 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	HIF3A	Q9Y2N7	669 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	TRAF6	Q9Y4K3	522 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	LRP1	Q07954	4544 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	TANC2	Q9HCD6	1990 aa		4.12	□□□□□ -1.75
MSI2-216	ENST00000582772	CFAP73	A6NFT4	308 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	C17orf105	B2RV13	164 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772		H7C0C1	242 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	APOC4-APOC2	K7ER74	178 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	LDLRAD4	O15165	306 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SEC14L5	O43304	696 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ICOSLG	O75144	302 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	C1orf105	O95561	183 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	AIFM1	O95831	613 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	APOC2	P02655	101 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ADRA2A	P08913	450 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	FAH	P16930	419 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	KRT15	P19012	456 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	CCNC	P24863	283 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ADRA1D	P25100	572 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ACRV1	P26436	265 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	RBL1	P28749	1068 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	CD80	P33681	288 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ELK3	P41970	407 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	MAGEA6	P43360	314 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	OR3A2	P47893	321 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ATP5O	P48047	213 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC18A2	Q05940	514 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC10A2	Q12908	348 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	RIPK1	Q13546	671 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	PWP1	Q13610	501 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SPARCL1	Q14515	664 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ARHGAP19	Q14CB8	494 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	EBP	Q15125	230 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SNCB	Q16143	134 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	PDK4	Q16654	411 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	HADH	Q16836	314 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	GPR33	Q49SQ1	333 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	TMEM201	Q5SNT2	666 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC9A4	Q6AI14	798 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	GTF2IRD2B	Q6EKJ0	949 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	PLBD1	Q6P4A8	553 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	TTC23L	Q6PF05	361 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	DARS2	Q6PI48	645 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	LIAT1	Q6ZQX7	453 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	C3orf62	Q6ZUJ4	267 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF534	Q76KX8	674 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	NUFIP2	Q7Z417	695 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SNX20	Q7Z614	316 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	GTF2IRD2	Q86UP8	949 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	PLCZ1	Q86YW0	608 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF595	Q8IYB9	648 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	CA13	Q8N1Q1	262 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	MPP5	Q8N3R9	675 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	PLD5	Q8N7P1	536 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ABHD11	Q8NFV4	315 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	OR52N5	Q8NH56	324 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	RDH11	Q8TC12	318 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	RNF128	Q8TEB7	428 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	PYROXD1	Q8WU10	500 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC13A3	Q8WWT9	602 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SIGLEC10	Q96LC7	697 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	RNF157	Q96PX1	679 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ST6GALNAC5	Q9BVH7	336 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	PRRG4	Q9BZD6	226 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	BRINP2	Q9C0B6	783 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	WWTR1	Q9GZV5	400 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	DPAGT1	Q9H3H5	408 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF385D	Q9H6B1	395 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SSU72	Q9NP77	194 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	DYNLRB1	Q9NP97	96 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	PRTFDC1	Q9NRG1	225 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	TMEM184C	Q9NVA4	438 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	NTM	Q9P121	344 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	BAIAP2L1	Q9UHR4	511 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	ABCG2	Q9UNQ0	655 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	TEX264	Q9Y6I9	313 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	SPACA6	W5XKT8	324 aa		4.11	□□□□□ -1.75
MSI2-216	ENST00000582772	LOC285095	A0A1B0GVY8	99 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	TCRBV9S1A1T	A0A576	114 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	WDR91	A4D1P6	747 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	MEGF11	A6BM72	1044 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	RNF8	O76064	485 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	METTL18	O95568	372 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	ETHE1	O95571	254 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	CLIC3	O95833	236 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	EPO	P01588	193 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	CELA3B	P08861	270 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms