RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ATG10Q9H0Y0 220 aa1.89□□□□□ -2.11
SMCHD1-206ENST00000581631 ALDH8A1Q9H2A2 487 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-206ENST00000581631 PLLPQ9Y342 182 aa1.89□□□□□ -2.11
SMCHD1-206ENST00000581631 SLCO1B1Q9Y6L6 691 aa1.89□□□□□ -2.11
SMCHD1-206ENST00000581631 TTC21BQ7Z4L5 1316 aa1.89□□□□□ -2.11
SMCHD1-206ENST00000581631 GTF3C1Q12789 2109 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 CCDC7Q96M83 1385 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 RLFQ13129 1914 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 OR6C65A6NJZ3 312 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 GJE1A6NN92 205 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 WASH3PC4AMC7 463 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 TMX2-CTNND1H3BSU7 103 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 HCN1O60741 890 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 ICOSLGO75144 302 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 ZNF324O75467 553 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 HBQ1P09105 142 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 UQCRBP14927 111 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 GCFC2P16383 781 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 HLA-DPA1P20036 260 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 AXLP30530 894 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 CYLC1P35663 651 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 YBEYP58557 167 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 CSNK1G2P78368 415 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 NTHL1P78549 312 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 MAP2K1Q02750 393 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 GABPB1Q06547 395 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 SLC10A7Q0GE19 358 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 KCTD19Q17RG1 926 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 WDR74Q6RFH5 385 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 WASH2PQ6VEQ5 465 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 ZFP2Q6ZN57 461 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 ARCQ7LC44 396 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 RABEPKQ7Z6M1 372 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 ZNF429Q86V71 674 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 VRK2Q86Y07 508 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 H1FOOQ8IZA3 346 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 LINC01561Q8N1V8 128 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 ZNF561Q8N587 486 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 RNF148Q8N7C7 305 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 TPRX1Q8N7U7 411 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 MINDY2Q8NBR6 621 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 MDS2Q8NDY4 140 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 FAM151AQ8WW52 585 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 POLR2J2Q9GZM3 115 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 POLR2J3Q9H1A7 115 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 THAP9Q9H5L6 903 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 NTN4Q9HB63 628 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 LPAR2Q9HBW0 351 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 CYTH4Q9UIA0 394 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 BTNL2Q9UIR0 455 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 PRPF19Q9UMS4 504 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 UGT2A1Q9Y4X1 527 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 ASTN1O14525 1302 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 ABCC4O15439 1325 aa1.88□□□□□ -2.11
SMCHD1-206ENST00000581631 A0A1W2PQ67 120 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 ERVV-1B6SEH8 477 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 H3BMQ9 156 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 CCDC192P0DO97 292 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 PDHBP11177 359 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 BDKRB1P46663 353 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 LHX2P50458 406 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 PRPS1P60891 318 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 AP1B1Q10567 949 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 WASHC5Q12768 1159 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 ARFRP1Q13795 201 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 NDUFA9Q16795 377 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 LIPNQ5VXI9 398 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 ARMCX2Q7L311 632 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 NRMQ8IXM6 262 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 MSANTD4Q8NCY6 345 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 OR56B1Q8NGI3 324 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 SLC13A3Q8WWT9 602 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 SLC5A11Q8WWX8 675 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 TMEM186Q96B77 213 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 CELF6Q96J87 481 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 VSTM2LQ96N03 204 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 OR5B2Q96R09 309 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 TBCDQ9BTW9 1192 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 SLC17A9Q9BYT1 436 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 CRNKL1Q9BZJ0 848 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 ROPN1Q9HAT0 212 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 POLD4Q9HCU8 107 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 YAE1D1Q9NRH1 226 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 ANO10Q9NW15 660 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 ANGPTL2Q9UKU9 493 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 AP4B1Q9Y6B7 739 aa1.87□□□□□ -2.11
SMCHD1-206ENST00000581631 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 SULT2B1O00204 365 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 DUX1O43812 170 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 ZNF780AO75290 641 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 SNAPINO95295 136 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 PCCAP05165 728 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 CA3P07451 260 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 RRASP10301 218 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 ALPPL2P10696 532 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 HNRNPA2B1P22626 353 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 COX7A1P24310 79 aa1.86□□□□□ -2.11
SMCHD1-206ENST00000581631 PRDX3P30048 256 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms