RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 SPATA7Q9P0W8 599 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 DDX49Q9Y6V7 483 aaKnown RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 AKAP11Q9UKA4 1901 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 GAKO14976 1311 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 COL2A1P02458 1487 aaPredicted RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 MAGEB16A2A368 324 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ZNF879B4DU55 563 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 SUPT3HB4E1H0 165 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 SPECC1L-ADORA2AF8WAN1 911 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 TBX19O60806 448 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ATP9AO75110 1047 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 SNNO75324 88 aaPredicted RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 CLPXO76031 633 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 LGI1O95970 557 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 MBD3O95983 291 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 CXCL10P02778 98 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 NCF2P19878 526 aaPredicted RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 PCMT1P22061 227 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ACKR3P25106 362 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 S100A5P33763 92 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 DLSTP36957 453 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 BTDP43251 543 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 HAAOP46952 286 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 SUCLG1P53597 346 aaKnown RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 PEX3P56589 373 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 GSTO1P78417 241 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 CNTN2Q02246 1040 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 GPR50Q13585 617 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ACKR1Q16570 336 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 HIKESHIQ53FT3 197 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 PIP5KL1Q5T9C9 394 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 LRRC38Q5VT99 294 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 LYPLAL1Q5VWZ2 237 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 PLPP4Q5VZY2 271 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ZNF776Q68DI1 518 aaPredicted RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 TMEM64Q6YI46 380 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 TIPARPQ7Z3E1 657 aaKnown RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 NANOGNBQ7Z5D8 188 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 SLC25A42Q86VD7 318 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 CENPLQ8N0S6 344 aaPredicted RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 CSGALNACT2Q8N6G5 542 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 FADS6Q8N9I5 356 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 BBS1Q8NFJ9 593 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 OR52J3Q8NH60 311 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ACMSDQ8TDX5 336 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 FCGR1BQ92637 280 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 C11orf52Q96A22 123 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 RASD2Q96D21 266 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 CDKN2AIPNLQ96HQ2 116 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 RPGRIP1Q96KN7 1286 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 C4orf36Q96KX1 117 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 MTMR9Q96QG7 549 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 BPIFA3Q9BQP9 254 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 OCR1Q9BZK8 76 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 STRADBQ9C0K7 418 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 MAGT1Q9H0U3 335 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ADNPQ9H2P0 1102 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 WDR41Q9HAD4 459 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 PLEKHA3Q9HB20 300 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 TREM1Q9NP99 234 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ZCCHC3Q9NUD5 404 aaKnown RBP3.54□□□□□ -1.84
NF1-220ENST00000581113 PIGVQ9NUD9 493 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 RDH8Q9NYR8 311 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 IL20RAQ9UHF4 553 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 TSPAN16Q9UKR8 245 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ETV7Q9Y603 341 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 AUP1Q9Y679 476 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 MROH7-TTC4A0A0A0MT08 1334 aa3.54□□□□□ -1.84
NF1-220ENST00000581113 ARAP2Q8WZ64 1704 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ECM29Q5VYK3 1845 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 TRGV8A0A0C4DH27 118 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 A0A0U1RRA0 63 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 OR52A4PA6NMU1 304 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 RSPH10B2B2RC85 870 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 K7ERQ8 282 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 P2RX6O15547 441 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ZW10O43264 779 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 DFNA5O60443 496 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 NIPSNAP2O75323 286 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 GLAP06280 429 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ASNSP08243 561 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 HOXD4P09016 255 aaPredicted RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 RSPH10BP0C881 870 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ZNF24P17028 368 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 GJB2P29033 226 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 OR1D2P34982 312 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 ATP5C1P36542 298 aaKnown RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 CRYBA2P53672 197 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 TPM4P67936 248 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 NUCB2P80303 420 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 RBBP4Q09028 425 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 BST1Q10588 318 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 SIX1Q15475 284 aaPredicted RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 ZNF239Q16600 458 aaKnown RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 ECSCRQ19T08 205 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 RFX7Q2KHR2 1363 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 RFTN2Q52LD8 501 aaPredicted RBP3.53□□□□□ -1.84
NF1-220ENST00000581113 TMEM41BQ5BJD5 291 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 RABGAP1LQ5R372 815 aa3.53□□□□□ -1.84
NF1-220ENST00000581113 AGBL2Q5U5Z8 902 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms