RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	TRAF6	Q9Y4K3	522 aa		5.18	□□□□□ -1.58
KPNB1-209	ENST00000580158	TENM3	Q9P273	2699 aa		5.18	□□□□□ -1.58
KPNB1-209	ENST00000580158	SHISA3	A0PJX4	238 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	CLPSL1	A2RUU4	121 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ANKRD34B	A5PLL1	514 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ATP6V1G2-DDX39B	F2Z307	99 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	T	O15178	435 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ADAMDEC1	O15204	470 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	PHGDH	O43175	533 aa	Known RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	DHH	O43323	396 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	SH3BGRL	O75368	114 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	DNAJC8	O75937	253 aa	Predicted RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	NGF	P01138	241 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	OPN1LW	P04000	364 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	OR4A8	P0C604	315 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	NR2F6	P10588	404 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	COX5A	P20674	150 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	EVI2B	P34910	448 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	PTPN7	P35236	360 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	FEN1	P39748	380 aa	Known RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	MARCKSL1	P49006	195 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	HNMT	P50135	292 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	GAS1	P54826	345 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	RAG2	P55895	527 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	PSPH	P78330	225 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	STX5	Q13190	355 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	SLC9A3R2	Q15599	337 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	EFNB3	Q15768	340 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ADRM1	Q16186	407 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ASTE1	Q2TB18	679 aa	Predicted RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ARMCX4	Q5H9R4	360 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	PAGE2B	Q5JRK9	111 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ANKRD22	Q5VYY1	191 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ADNP2	Q6IQ32	1131 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	PAQR3	Q6TCH7	311 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	CYP20A1	Q6UW02	462 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	FCRLA	Q7L513	359 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	LUZP1	Q86V48	1076 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	DENND6A	Q8IWF6	608 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ZNF100	Q8IYN0	542 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	UBE2J2	Q8N2K1	259 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	SLC43A2	Q8N370	569 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ZCCHC7	Q8N3Z6	543 aa	Known RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	RNF10	Q8N5U6	811 aa	Known RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	CDYL2	Q8N8U2	506 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	OR4K14	Q8NGD5	310 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	CALML6	Q8TD86	181 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	DUSP19	Q8WTR2	217 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	RGMA	Q96B86	450 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	IQCD	Q96DY2	449 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	PTCD3	Q96EY7	689 aa	Known RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ADGRG7	Q96K78	797 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	MCMBP	Q9BTE3	642 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	MS4A8	Q9BY19	250 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	TSGA10	Q9BZW7	698 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	PLK3	Q9H4B4	646 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	DYNLRB1	Q9NP97	96 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	CA10	Q9NS85	328 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	LYAR	Q9NX58	379 aa	Known RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	KLHL9	Q9P2J3	617 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	NUP50	Q9UKX7	468 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	ZNF490	Q9ULM2	529 aa	Predicted RBP	5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158	VDAC3	Q9Y277	283 aa		5.17	□□□□□ -1.58
KPNB1-209	ENST00000580158		A0A0J9YW62	118 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	SH3PXD2B	A1X283	911 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	WASHC1	A8K0Z3	465 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	NOTO	A8MTQ0	251 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158		B4DXG7	233 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	LYNX1	G3V0Z9	82 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	FOXE1	O00358	373 aa	Predicted RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	SAP18	O00422	153 aa	Known RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	PLPP2	O43688	288 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	PIP5K1C	O60331	668 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	TSPAN2	O60636	221 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	ERLIN1	O75477	346 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	SEC14L2	O76054	403 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	HAUS5	O94927	633 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	IFNB1	P01574	187 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	ALOX5	P09917	674 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	LYNX1	P0DP58	116 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	POR	P16435	677 aa	Predicted RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	SELE	P16581	610 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	ACHE	P22303	614 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	MTNR1A	P48039	350 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	XK	P51811	444 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	TMEM33	P57088	247 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	SUMO1	P63165	101 aa	Known RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	DHX34	Q14147	1143 aa	Known RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	EXOSC7	Q15024	291 aa	Known RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	PDCD1	Q15116	288 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	ZNF239	Q16600	458 aa	Known RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	C1QTNF12	Q5T7M4	302 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	OR52E8	Q6IFG1	317 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	SASS6	Q6UVJ0	657 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	LMNTD2	Q8IXW0	634 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	POP5	Q969H6	163 aa	Known RBP	5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	UBE2E3	Q969T4	207 aa		5.16	□□□□□ -1.58
KPNB1-209	ENST00000580158	RAB39B	Q96DA2	213 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms