RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 GATSQ8NAP1 163 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 SYT14Q8NB59 555 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 ANKK1Q8NFD2 765 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 OR2I1PQ8NGU4 316 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 OR4C3Q8NH37 302 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 MCFD2Q8NI22 146 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 FANK1Q8TC84 345 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 ZPLD1Q8TCW7 415 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 BRIX1Q8TDN6 353 aaKnown RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 ZNF721Q8TF20 911 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 SMAP2Q8WU79 429 aaPredicted RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 ZNRF4Q8WWF5 429 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 NR4A3Q92570 626 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 RIT1Q92963 219 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 CCDC74AQ96AQ1 378 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 EFHD2Q96C19 240 aaPredicted RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 ZNF501Q96CX3 271 aaPredicted RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 ZHX1-C8orf76Q96EF9 292 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 DTNBP1Q96EV8 351 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 DGAT2Q96PD7 388 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 SDHCQ99643 169 aaPredicted RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 TIMP4Q99727 224 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 ZNF559Q9BR84 538 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 NUDT22Q9BRQ3 303 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 ZNF426Q9BUY5 554 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 NRSN2Q9GZP1 204 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 RAB33BQ9H082 229 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 PCED1AQ9H1Q7 454 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 OR10A5Q9H207 317 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 UBQLN3Q9H347 655 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 FN3KQ9H479 309 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 CCDC86Q9H6F5 360 aaKnown RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 TRIM45Q9H8W5 580 aaPredicted RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 MCCC2Q9HCC0 563 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 PDE7BQ9NP56 450 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 FBXO8Q9NRD0 319 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 SLC22A11Q9NSA0 550 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 CUTCQ9NTM9 273 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 KLHL28Q9NXS3 571 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 IL20Q9NYY1 176 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 CCDC59Q9P031 241 aaKnown RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 EPHA6Q9UF33 1036 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 FBXL4Q9UKA2 621 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 ATXN7L1Q9ULK2 861 aaPredicted RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 SIGLEC7Q9Y286 467 aa4.26□□□□□ -1.73
NUP85-213ENST00000579838 EXOGQ9Y2C4 368 aaKnown RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 MRPS17Q9Y2R5 130 aaKnown RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 CAB39Q9Y376 341 aaPredicted RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 RPL36Q9Y3U8 105 aaKnown RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 SIRT4Q9Y6E7 314 aaPredicted RBP4.26□□□□□ -1.73
NUP85-213ENST00000579838 IGHV3-20A0A0C4DH32 117 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 PNMA8CA0A1B0GUJ8 204 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 SHISA3A0PJX4 238 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 SERINC4A6NH21 518 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 C17orf105B2RV13 164 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 B4DXG7 233 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 CLDN25C9JDP6 229 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 H0YIG0 161 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 CCRL2O00421 344 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 DLL1O00548 723 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 PLD2O14939 933 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 PRODHO43272 600 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 CHP2O43745 196 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 GDF9O60383 454 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 FMO6PO60774 539 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 PRAMEF2O60811 474 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 CNOT3O75175 753 aaKnown RBP4.25□□□□□ -1.73
NUP85-213ENST00000579838 OR2B3O76000 313 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 TIAF1O95411 115 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 AK1P00568 194 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 IGHA1P01876 353 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 IFNA16P05015 189 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 GUSBP08236 651 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 MRPL3P09001 348 aaKnown RBP4.25□□□□□ -1.73
NUP85-213ENST00000579838 CPEP16870 476 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 GTF2E2P29084 291 aaKnown RBP4.25□□□□□ -1.73
NUP85-213ENST00000579838 RPS19P39019 145 aaKnown RBP4.25□□□□□ -1.73
NUP85-213ENST00000579838 SLC1A3P43003 542 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 CLK1P49759 484 aaKnown RBP4.25□□□□□ -1.73
NUP85-213ENST00000579838 ATP12AP54707 1039 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 CDH11P55287 796 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 CTBP2P56545 445 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 HSD17B7P56937 341 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 SLC37A1P57057 533 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 HNRNPKP61978 463 aaKnown RBP eCLIP4.25□□□□□ -1.73
NUP85-213ENST00000579838 LTBQ06643 244 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 MLLT11Q13015 90 aaPredicted RBP4.25□□□□□ -1.73
NUP85-213ENST00000579838 TMED1Q13445 227 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 MYO9BQ13459 2157 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 CRMP1Q14194 572 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 INSL4Q14641 139 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 SPHARQ15513 63 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 VWA2Q5GFL6 755 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 C3orf38Q5JPI3 329 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 SLC35F1Q5T1Q4 408 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 LIPKQ5VXJ0 399 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 PLBD1Q6P4A8 553 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 GUSBP11Q6P575 273 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 DCDC5Q6ZRR9 648 aa4.25□□□□□ -1.73
NUP85-213ENST00000579838 SHISA6Q6ZSJ9 500 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms