RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 ID2Q02363 134 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.83□□□□□ -0.36
RNF43-202ENST00000577625 PRAMEF8Q5VWM4 474 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 PRAMEF7Q5VXH5 474 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 OR7G2Q8NG99 324 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 OR9A4Q8NGU2 314 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 C16orf58Q96GQ5 468 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 CRELD1Q96HD1 420 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 ZNF354BQ96LW1 612 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 OPALINQ96PE5 141 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 OR7D2Q96RA2 312 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 ELF4Q99607 663 aaPredicted RBP12.83□□□□□ -0.36
RNF43-202ENST00000577625 TRIM45Q9H8W5 580 aaPredicted RBP12.83□□□□□ -0.36
RNF43-202ENST00000577625 KCND3Q9UK17 655 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 MYO15AQ9UKN7 3530 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 IGHV1OR21-1A0A087WYE8 117 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 A8MVJ9 347 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 J3KTA2 159 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 NUDT21O43809 227 aaKnown RBP12.82□□□□□ -0.36
RNF43-202ENST00000577625 FGF17O60258 216 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 LDB3O75112 727 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 CHRM4P08173 479 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 SOX18P35713 384 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 LIMS1P48059 325 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 GBX2P52951 348 aaPredicted RBP12.82□□□□□ -0.36
RNF43-202ENST00000577625 OR1D5P58170 312 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 GRK1Q15835 563 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 CLLU1Q5K131 121 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 FAM111BQ6SJ93 734 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 CCDC71Q8IV32 467 aaPredicted RBP12.82□□□□□ -0.36
RNF43-202ENST00000577625 NLGN4YQ8NFZ3 816 aaPredicted RBP12.82□□□□□ -0.36
RNF43-202ENST00000577625 COL26A1Q96A83 441 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 MS4A4EQ96PG1 132 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 USB1Q9BQ65 265 aaKnown RBP12.82□□□□□ -0.36
RNF43-202ENST00000577625 SPATA5L1Q9BVQ7 753 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 ACTRT3Q9BYD9 372 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 ACER3Q9NUN7 267 aa12.82□□□□□ -0.36
RNF43-202ENST00000577625 FAM227AF5H4B4 570 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 MYL12BO14950 172 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 ANXA8P13928 327 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 MYL12AP19105 171 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 RAB38P57729 211 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 RRAS2P62070 204 aaPredicted RBP12.81□□□□□ -0.36
RNF43-202ENST00000577625 PSPHP78330 225 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 MICAQ29983 383 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 EXOC3L2Q2M3D2 409 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 KLHL12Q53G59 568 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 C19orf48Q6RUI8 117 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 ENTHD1Q8IYW4 607 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 MAML2Q8IZL2 1156 aaPredicted RBP12.81□□□□□ -0.36
RNF43-202ENST00000577625 OR2L13Q8N349 312 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 OR10G2Q8NGC3 310 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 CD180Q99467 661 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 CHRNA10Q9GZZ6 450 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 EQTNQ9NQ60 294 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 SOHLH2Q9NX45 425 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 PTGFRNQ9P2B2 879 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 LIPT1Q9Y234 373 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 KCNE3Q9Y6H6 103 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 A0A0G2JPF8 293 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 CLCA1A8K7I4 914 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 HNRNPCL2B2RXH8 293 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 HNRNPCL3B7ZW38 293 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 SMLR1H3BR10 107 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 FOXS1O43638 330 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 NME6O75414 186 aaPredicted RBP12.81□□□□□ -0.36
RNF43-202ENST00000577625 ATP1B1P05026 303 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 CSF3P09919 207 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 HNRNPCL4P0DMR1 293 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 GNSP15586 552 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 ARRB1P49407 418 aaPredicted RBP12.81□□□□□ -0.36
RNF43-202ENST00000577625 HOXC5Q00444 222 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 GLYR1Q49A26 553 aaPredicted RBP12.81□□□□□ -0.36
RNF43-202ENST00000577625 OLIG3Q7RTU3 272 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 TAGAPQ8N103 731 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 OR52J3Q8NH60 311 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 UBE2FQ969M7 185 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 ZDHHC12Q96GR4 267 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 ZC3HAV1LQ96H79 300 aaKnown RBP12.81□□□□□ -0.36
RNF43-202ENST00000577625 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
RNF43-202ENST00000577625 FEVQ99581 238 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 GABARAPL3Q9BY60 117 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 PPIL3Q9H2H8 161 aaKnown RBP12.81□□□□□ -0.36
RNF43-202ENST00000577625 MCCC2Q9HCC0 563 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 IFT46Q9NQC8 304 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 PILRBQ9UKJ0 227 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 PLCL2Q9UPR0 1127 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 CMAHPQ9Y471 501 aa12.81□□□□□ -0.36
RNF43-202ENST00000577625 A0A0A6YYC8 382 aaPredicted RBP12.8□□□□□ -0.36
RNF43-202ENST00000577625 DUXAA6NLW8 204 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 E9PQ18 207 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 I3L1I5 382 aaPredicted RBP12.8□□□□□ -0.36
RNF43-202ENST00000577625 LAMTOR5O43504 91 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 CHST10O43529 356 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 GADD45GO95257 159 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 GPR75O95800 540 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 RRASP10301 218 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 MYF5P13349 255 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 GLB1P16278 677 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 F8A1P23610 371 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms