RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SUCLG1P53597 346 aaKnown RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 PNLIPRP2P54317 469 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 PRKAA2P54646 552 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 CLDN20P56880 219 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 SIRPAP78324 504 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 SORDQ00796 357 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 GAB1Q13480 694 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 EFR3AQ14156 821 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 TRIM25Q14258 630 aaKnown RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 ERCC6LQ2NKX8 1250 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 SPDYAQ5MJ70 313 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 ANKRD26P1Q6NSI1 321 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 PPP4R4Q6NUP7 873 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 ZNF474Q6S9Z5 364 aaPredicted RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 TMEM107Q6UX40 140 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 P4HA3Q7Z4N8 544 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 GALNT10Q86SR1 603 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 MARCH3Q86UD3 253 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 GRAMD2AQ8IUY3 354 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 GSPT2Q8IYD1 628 aaKnown RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 FAM9CQ8IZT9 166 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 GBP7Q8N8V2 638 aaPredicted RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 CNEP1R1Q8N9A8 125 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 OR2M3Q8NG83 312 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 OR4K17Q8NGC6 315 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 DUSP19Q8WTR2 217 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 RNF138Q8WVD3 245 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 SMPDL3BQ92485 455 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 STARD4Q96DR4 205 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 C11orf24Q96F05 449 aaPredicted RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 ZNF845Q96IR2 970 aaPredicted RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 EGLN2Q96KS0 407 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 WFIKKN1Q96NZ8 548 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 BBS4Q96RK4 519 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 PIGQQ9BRB3 760 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 SFXN3Q9BWM7 321 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 QRSL1Q9H0R6 528 aaKnown RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 OPN3Q9H1Y3 402 aaPredicted RBP5.6□□□□□ -1.51
NUP88-212ENST00000576708 GLIPR2Q9H4G4 154 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 YY1AP1Q9H869 796 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 MID1IP1Q9NPA3 183 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 GIMAP4Q9NUV9 329 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 KLHL28Q9NXS3 571 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 SENP1Q9P0U3 644 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 PPP4R1LQ9P1A2 415 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 TBK1Q9UHD2 729 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 ZNF337Q9Y3M9 751 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 OR10H1Q9Y4A9 318 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 PTGDR2Q9Y5Y4 395 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 DOCK7Q96N67 2140 aa5.6□□□□□ -1.51
NUP88-212ENST00000576708 AKAP6Q13023 2319 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 A0A0A6YYJ9 748 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 OR2M5A3KFT3 312 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 H3BML4 177 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 UPK1AO00322 258 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 HCRTR2O43614 444 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 PLOD3O60568 738 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 OPN1LWP04000 364 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 ENO1P06733 434 aaKnown RBP5.59□□□□□ -1.51
NUP88-212ENST00000576708 ABHD2P08910 425 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 DDCP20711 480 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 EFNA1P20827 205 aaPredicted RBP5.59□□□□□ -1.51
NUP88-212ENST00000576708 CHMP24386 653 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 EVI2BP34910 448 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 MPIP34949 423 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 PKNOX1P55347 436 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 LGALS4P56470 323 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 DSCR4P56555 118 aaPredicted RBP5.59□□□□□ -1.51
NUP88-212ENST00000576708 LCP2Q13094 533 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 SLC29A2Q14542 456 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 HEPACAMQ14CZ8 416 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 TAF11Q15544 211 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 SPIN4Q56A73 249 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 LGSNQ5TDP6 509 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 RAET1LQ5VY80 246 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 FAM71E1Q6IPT2 247 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 AAGABQ6PD74 315 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 APOOLQ6UXV4 268 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 ZNF551Q7Z340 670 aaPredicted RBP5.59□□□□□ -1.51
NUP88-212ENST00000576708 ZNF550Q7Z398 422 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 CAMKMTQ7Z624 323 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 EXOC3L1Q86VI1 746 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 FADS6Q8N9I5 356 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 FBXO30Q8TB52 745 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 FNDC9Q8TBE3 224 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 PIK3R3Q92569 461 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 GFM2Q969S9 779 aaKnown RBP5.59□□□□□ -1.51
NUP88-212ENST00000576708 ELP4Q96EB1 424 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 L3HYPDHQ96EM0 354 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 PIK3IP1Q96FE7 263 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 OTUB1Q96FW1 271 aaPredicted RBP5.59□□□□□ -1.51
NUP88-212ENST00000576708 PGM2Q96G03 612 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 ZC3HAV1LQ96H79 300 aaKnown RBP5.59□□□□□ -1.51
NUP88-212ENST00000576708 AMDHD1Q96NU7 426 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 DACH2Q96NX9 599 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 FAM111AQ96PZ2 611 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 NPAS1Q99742 590 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 KLHDC3Q9BQ90 382 aa5.59□□□□□ -1.51
NUP88-212ENST00000576708 PINK1Q9BXM7 581 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms